Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HES2Q9Y543 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HES2Q9Y543 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HES2Q9Y543 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
HES2Q9Y543 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HES2Q9Y543 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HES2Q9Y543 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HES2Q9Y543 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.42■■□□□ 1.66
HES2Q9Y543 AC010997.5-201ENST00000609182 354 ntBASIC25.42■■□□□ 1.66
HES2Q9Y543 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.41■■□□□ 1.66
HES2Q9Y543 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HES2Q9Y543 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HES2Q9Y543 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.41■■□□□ 1.66
HES2Q9Y543 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.41■■□□□ 1.66
HES2Q9Y543 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HES2Q9Y543 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.41■■□□□ 1.66
HES2Q9Y543 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.41■■□□□ 1.66
HES2Q9Y543 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HES2Q9Y543 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HES2Q9Y543 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
HES2Q9Y543 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
HES2Q9Y543 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
HES2Q9Y543 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.4■■□□□ 1.66
HES2Q9Y543 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.4■■□□□ 1.66
HES2Q9Y543 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HES2Q9Y543 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.39■■□□□ 1.66
HES2Q9Y543 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
HES2Q9Y543 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.39■■□□□ 1.66
HES2Q9Y543 MTDHP2-201ENST00000601468 714 ntBASIC25.39■■□□□ 1.66
HES2Q9Y543 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.39■■□□□ 1.66
HES2Q9Y543 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
HES2Q9Y543 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HES2Q9Y543 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
HES2Q9Y543 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HES2Q9Y543 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.38■■□□□ 1.65
HES2Q9Y543 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.38■■□□□ 1.65
HES2Q9Y543 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
HES2Q9Y543 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.38■■□□□ 1.65
HES2Q9Y543 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.38■■□□□ 1.65
HES2Q9Y543 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HES2Q9Y543 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.37■■□□□ 1.65
HES2Q9Y543 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HES2Q9Y543 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.36■■□□□ 1.65
HES2Q9Y543 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HES2Q9Y543 AC008406.3-201ENST00000620001 1374 ntBASIC25.35■■□□□ 1.65
HES2Q9Y543 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
HES2Q9Y543 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.35■■□□□ 1.65
HES2Q9Y543 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
HES2Q9Y543 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.34■■□□□ 1.65
HES2Q9Y543 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.34■■□□□ 1.65
HES2Q9Y543 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.34■■□□□ 1.65
HES2Q9Y543 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HES2Q9Y543 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HES2Q9Y543 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
HES2Q9Y543 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HES2Q9Y543 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
HES2Q9Y543 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.33■■□□□ 1.65
HES2Q9Y543 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HES2Q9Y543 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HES2Q9Y543 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HES2Q9Y543 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
HES2Q9Y543 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
HES2Q9Y543 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.31■■□□□ 1.64
HES2Q9Y543 SNX5-217ENST00000606557 1087 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 MIR6724-1-201ENST00000616420 92 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 MIR6724-2-201ENST00000616483 92 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 MIR6724-4-201ENST00000617390 92 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 MIR6724-3-201ENST00000622482 92 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 AL117332.1-201ENST00000622628 974 ntBASIC25.31■■□□□ 1.64
HES2Q9Y543 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.31■■□□□ 1.64
HES2Q9Y543 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.31■■□□□ 1.64
HES2Q9Y543 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HES2Q9Y543 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HES2Q9Y543 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.31■■□□□ 1.64
HES2Q9Y543 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.3■■□□□ 1.64
HES2Q9Y543 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.3■■□□□ 1.64
HES2Q9Y543 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.29■■□□□ 1.64
HES2Q9Y543 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HES2Q9Y543 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HES2Q9Y543 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.29■■□□□ 1.64
HES2Q9Y543 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.29■■□□□ 1.64
HES2Q9Y543 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.29■■□□□ 1.64
HES2Q9Y543 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.29■■□□□ 1.64
HES2Q9Y543 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.29■■□□□ 1.64
HES2Q9Y543 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.29■■□□□ 1.64
HES2Q9Y543 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HES2Q9Y543 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.28■■□□□ 1.64
HES2Q9Y543 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HES2Q9Y543 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.28■■□□□ 1.64
HES2Q9Y543 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.28■■□□□ 1.64
HES2Q9Y543 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.28■■□□□ 1.64
HES2Q9Y543 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.28■■□□□ 1.64
HES2Q9Y543 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.28■■□□□ 1.64
HES2Q9Y543 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HES2Q9Y543 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms