Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC135731.1-201ENST00000569415 2548 ntBASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC3Q9UN70 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 AC011551.1-201ENST00000614101 683 ntBASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDHGC3Q9UN70 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 HLA-L-211ENST00000482052 1765 ntBASIC24.75■■□□□ 1.55
PCDHGC3Q9UN70 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC3Q9UN70 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 MIR4508-201ENST00000584178 70 ntBASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 LINC01124-201ENST00000409786 2117 ntBASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGC3Q9UN70 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGC3Q9UN70 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGC3Q9UN70 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHGC3Q9UN70 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHGC3Q9UN70 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
PCDHGC3Q9UN70 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 LINC00543-201ENST00000567234 1845 ntBASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC3Q9UN70 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHGC3Q9UN70 AC093323.1-202ENST00000635031 2045 ntBASIC24.7■■□□□ 1.54
PCDHGC3Q9UN70 AC141586.4-201ENST00000624558 1573 ntBASIC24.7■■□□□ 1.54
PCDHGC3Q9UN70 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGC3Q9UN70 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 AC103834.1-201ENST00000520383 144 ntBASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC3Q9UN70 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 KRT18P24-201ENST00000344739 1156 ntBASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC3Q9UN70 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 AC120024.1-201ENST00000562672 995 ntBASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGC3Q9UN70 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGC3Q9UN70 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHGC3Q9UN70 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms