Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.17■■□□□ 1.14
VCX3BQ9H321 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.17■■□□□ 1.14
VCX3BQ9H321 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.17■■□□□ 1.14
VCX3BQ9H321 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VCX3BQ9H321 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VCX3BQ9H321 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
VCX3BQ9H321 AC110285.7-201ENST00000624417 1536 ntBASIC22.16■■□□□ 1.14
VCX3BQ9H321 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VCX3BQ9H321 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VCX3BQ9H321 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VCX3BQ9H321 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.15■■□□□ 1.14
VCX3BQ9H321 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VCX3BQ9H321 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.14■■□□□ 1.14
VCX3BQ9H321 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VCX3BQ9H321 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.14■■□□□ 1.13
VCX3BQ9H321 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VCX3BQ9H321 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VCX3BQ9H321 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 SLC25A24-204ENST00000569674 2357 ntBASIC22.13■■□□□ 1.13
VCX3BQ9H321 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VCX3BQ9H321 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VCX3BQ9H321 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VCX3BQ9H321 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 AC137767.1-201ENST00000602918 1920 ntBASIC22.13■■□□□ 1.13
VCX3BQ9H321 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VCX3BQ9H321 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.13■■□□□ 1.13
VCX3BQ9H321 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 AC127496.7-201ENST00000625110 1798 ntBASIC22.12■■□□□ 1.13
VCX3BQ9H321 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.12■■□□□ 1.13
VCX3BQ9H321 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
VCX3BQ9H321 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
VCX3BQ9H321 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.11■■□□□ 1.13
VCX3BQ9H321 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.11■■□□□ 1.13
VCX3BQ9H321 AL391121.1-201ENST00000607967 1349 ntBASIC22.11■■□□□ 1.13
VCX3BQ9H321 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.11■■□□□ 1.13
VCX3BQ9H321 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.11■■□□□ 1.13
VCX3BQ9H321 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
VCX3BQ9H321 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
VCX3BQ9H321 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VCX3BQ9H321 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
VCX3BQ9H321 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
VCX3BQ9H321 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
VCX3BQ9H321 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VCX3BQ9H321 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 AC108673.1-201ENST00000510422 1159 ntBASIC22.09■■□□□ 1.13
VCX3BQ9H321 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.09■■□□□ 1.13
VCX3BQ9H321 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms