Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CDH23Q9H251 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.25■■□□□ 1.63
CDH23Q9H251 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDH23Q9H251 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDH23Q9H251 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.24■■□□□ 1.63
CDH23Q9H251 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDH23Q9H251 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDH23Q9H251 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.23■■□□□ 1.63
CDH23Q9H251 SYT6-210ENST00000641643 1587 ntBASIC25.23■■□□□ 1.63
CDH23Q9H251 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDH23Q9H251 SLC47A1P1-202ENST00000449666 945 ntBASIC25.23■■□□□ 1.63
CDH23Q9H251 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDH23Q9H251 AC027682.1-201ENST00000562846 899 ntBASIC25.23■■□□□ 1.63
CDH23Q9H251 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDH23Q9H251 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDH23Q9H251 HLA-L-209ENST00000420110 1011 ntBASIC25.22■■□□□ 1.63
CDH23Q9H251 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.22■■□□□ 1.63
CDH23Q9H251 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.22■■□□□ 1.63
CDH23Q9H251 AL031602.1-201ENST00000633169 911 ntBASIC25.22■■□□□ 1.63
CDH23Q9H251 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDH23Q9H251 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.21■■□□□ 1.63
CDH23Q9H251 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDH23Q9H251 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDH23Q9H251 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDH23Q9H251 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.21■■□□□ 1.63
CDH23Q9H251 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDH23Q9H251 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDH23Q9H251 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDH23Q9H251 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDH23Q9H251 IRS3P-201ENST00000223076 1006 ntBASIC25.2■■□□□ 1.62
CDH23Q9H251 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.2■■□□□ 1.62
CDH23Q9H251 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CDH23Q9H251 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDH23Q9H251 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.19■■□□□ 1.62
CDH23Q9H251 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDH23Q9H251 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDH23Q9H251 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CDH23Q9H251 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.19■■□□□ 1.62
CDH23Q9H251 AL137784.2-201ENST00000607332 1000 ntBASIC25.19■■□□□ 1.62
CDH23Q9H251 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.19■■□□□ 1.62
CDH23Q9H251 AC034268.1-201ENST00000441047 882 ntBASIC25.19■■□□□ 1.62
CDH23Q9H251 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDH23Q9H251 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDH23Q9H251 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDH23Q9H251 DRD5P2-201ENST00000421395 2012 ntBASIC25.18■■□□□ 1.62
CDH23Q9H251 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDH23Q9H251 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.18■■□□□ 1.62
CDH23Q9H251 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDH23Q9H251 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.17■■□□□ 1.62
CDH23Q9H251 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDH23Q9H251 ABHD17AP1-201ENST00000358206 933 ntBASIC25.17■■□□□ 1.62
CDH23Q9H251 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDH23Q9H251 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.17■■□□□ 1.62
CDH23Q9H251 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.17■■□□□ 1.62
CDH23Q9H251 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
CDH23Q9H251 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDH23Q9H251 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.16■■□□□ 1.62
CDH23Q9H251 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.16■■□□□ 1.62
CDH23Q9H251 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDH23Q9H251 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDH23Q9H251 CA15P2-201ENST00000611168 834 ntBASIC25.15■■□□□ 1.62
CDH23Q9H251 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDH23Q9H251 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDH23Q9H251 KRT18P5-201ENST00000436075 1291 ntBASIC25.15■■□□□ 1.62
CDH23Q9H251 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.14■■□□□ 1.62
CDH23Q9H251 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.14■■□□□ 1.62
CDH23Q9H251 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CDH23Q9H251 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.14■■□□□ 1.61
CDH23Q9H251 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDH23Q9H251 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDH23Q9H251 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDH23Q9H251 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDH23Q9H251 YBX1P1-201ENST00000445822 960 ntBASIC25.13■■□□□ 1.61
CDH23Q9H251 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.13■■□□□ 1.61
CDH23Q9H251 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CDH23Q9H251 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.12■■□□□ 1.61
CDH23Q9H251 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.11■■□□□ 1.61
CDH23Q9H251 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDH23Q9H251 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.11■■□□□ 1.61
CDH23Q9H251 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDH23Q9H251 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDH23Q9H251 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDH23Q9H251 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.11■■□□□ 1.61
CDH23Q9H251 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDH23Q9H251 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDH23Q9H251 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
CDH23Q9H251 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDH23Q9H251 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.1■■□□□ 1.61
CDH23Q9H251 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L2-201ENST00000561772 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L6-201ENST00000626483 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L1-201ENST00000627662 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L8-201ENST00000629013 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L3-201ENST00000630187 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L7-201ENST00000630678 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 DUX4L5-201ENST00000630834 1275 ntBASIC25.1■■□□□ 1.61
CDH23Q9H251 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.09■■□□□ 1.61
CDH23Q9H251 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.09■■□□□ 1.61
CDH23Q9H251 FOXO3B-201ENST00000395675 1928 ntBASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms