Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 AC133561.1-201ENST00000568600 2415 ntBASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COMMD4Q9H0A8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD4Q9H0A8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD4Q9H0A8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD4Q9H0A8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.51■□□□□ 0.87
COMMD4Q9H0A8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD4Q9H0A8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 RP9P-202ENST00000450133 1212 ntBASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD4Q9H0A8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 ABCB10P4-201ENST00000566803 2184 ntBASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 AC068473.5-201ENST00000616428 2072 ntBASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD4Q9H0A8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 AC092296.2-201ENST00000589470 999 ntBASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD4Q9H0A8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 MIR639-201ENST00000384974 98 ntBASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 ECEL1P2-201ENST00000461596 1295 ntBASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.45■□□□□ 0.86
COMMD4Q9H0A8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 HLA-L-211ENST00000482052 1765 ntBASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 KRT18P10-201ENST00000388836 1287 ntBASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD4Q9H0A8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD4Q9H0A8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 AC093536.1-201ENST00000569153 554 ntBASIC20.42■□□□□ 0.86
COMMD4Q9H0A8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms