Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 UNC93B3-201ENST00000308076 687 ntBASIC23.09■■□□□ 1.29
PCDH15Q96QU1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH15Q96QU1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDH15Q96QU1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH15Q96QU1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH15Q96QU1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDH15Q96QU1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 AL136162.1-201ENST00000607711 1078 ntBASIC23.06■■□□□ 1.28
PCDH15Q96QU1 AC092666.2-201ENST00000613287 246 ntBASIC23.06■■□□□ 1.28
PCDH15Q96QU1 MIR6722-201ENST00000617286 78 ntBASIC23.06■■□□□ 1.28
PCDH15Q96QU1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 FOXO3B-201ENST00000395675 1928 ntBASIC23.06■■□□□ 1.28
PCDH15Q96QU1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH15Q96QU1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 AC024257.2-201ENST00000549699 147 ntBASIC23.05■■□□□ 1.28
PCDH15Q96QU1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH15Q96QU1 EDA-201ENST00000338901 1233 ntBASIC23.04■■□□□ 1.28
PCDH15Q96QU1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDH15Q96QU1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH15Q96QU1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDH15Q96QU1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 AC105265.2-201ENST00000467189 838 ntBASIC23.02■■□□□ 1.28
PCDH15Q96QU1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PCDH15Q96QU1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
PCDH15Q96QU1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH15Q96QU1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDH15Q96QU1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH15Q96QU1 MIR5787-201ENST00000611784 55 ntBASIC23■■□□□ 1.27
PCDH15Q96QU1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH15Q96QU1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH15Q96QU1 ERN1-208ENST00000606895 2068 ntBASIC22.99■■□□□ 1.27
PCDH15Q96QU1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH15Q96QU1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH15Q96QU1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 AP001330.3-201ENST00000520123 633 ntBASIC22.98■■□□□ 1.27
PCDH15Q96QU1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH15Q96QU1 AF213884.3-201ENST00000563833 479 ntBASIC22.98■■□□□ 1.27
PCDH15Q96QU1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH15Q96QU1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH15Q96QU1 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH15Q96QU1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH15Q96QU1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH15Q96QU1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH15Q96QU1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH15Q96QU1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH15Q96QU1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDH15Q96QU1 MIR939-201ENST00000401314 82 ntBASIC22.96■■□□□ 1.27
PCDH15Q96QU1 AC090877.2-201ENST00000558441 1738 ntBASIC22.96■■□□□ 1.27
PCDH15Q96QU1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH15Q96QU1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH15Q96QU1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDH15Q96QU1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH15Q96QU1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms