Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEH1LQ96EE3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEH1LQ96EE3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.21■□□□□ 0.83
SEH1LQ96EE3 AC141586.4-201ENST00000624558 1573 ntBASIC20.21■□□□□ 0.83
SEH1LQ96EE3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SEH1LQ96EE3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.2■□□□□ 0.82
SEH1LQ96EE3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 SPCS2P3-201ENST00000500401 656 ntBASIC20.19■□□□□ 0.82
SEH1LQ96EE3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.19■□□□□ 0.82
SEH1LQ96EE3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SEH1LQ96EE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEH1LQ96EE3 KRT18P60-201ENST00000312876 1297 ntBASIC20.17■□□□□ 0.82
SEH1LQ96EE3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.17■□□□□ 0.82
SEH1LQ96EE3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEH1LQ96EE3 NTF6A-201ENST00000591175 560 ntBASIC20.16■□□□□ 0.82
SEH1LQ96EE3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEH1LQ96EE3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SEH1LQ96EE3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.14■□□□□ 0.81
SEH1LQ96EE3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
SEH1LQ96EE3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEH1LQ96EE3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 DUX4L9-201ENST00000449051 1259 ntBASIC20.12■□□□□ 0.81
SEH1LQ96EE3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEH1LQ96EE3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms