Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.39■■□□□ 1.66
GBF1Q92538 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.39■■□□□ 1.66
GBF1Q92538 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.39■■□□□ 1.66
GBF1Q92538 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.39■■□□□ 1.66
GBF1Q92538 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GBF1Q92538 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
GBF1Q92538 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
GBF1Q92538 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
GBF1Q92538 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
GBF1Q92538 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
GBF1Q92538 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
GBF1Q92538 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GBF1Q92538 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.38■■□□□ 1.65
GBF1Q92538 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
GBF1Q92538 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
GBF1Q92538 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.37■■□□□ 1.65
GBF1Q92538 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
GBF1Q92538 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
GBF1Q92538 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
GBF1Q92538 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GBF1Q92538 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
GBF1Q92538 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GBF1Q92538 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.35■■□□□ 1.65
GBF1Q92538 IKBKGP1-201ENST00000612193 1073 ntBASIC25.35■■□□□ 1.65
GBF1Q92538 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.34■■□□□ 1.65
GBF1Q92538 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.34■■□□□ 1.65
GBF1Q92538 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GBF1Q92538 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
GBF1Q92538 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.34■■□□□ 1.65
GBF1Q92538 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
GBF1Q92538 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.33■■□□□ 1.65
GBF1Q92538 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
GBF1Q92538 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GBF1Q92538 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.33■■□□□ 1.65
GBF1Q92538 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.33■■□□□ 1.65
GBF1Q92538 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GBF1Q92538 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.32■■□□□ 1.64
GBF1Q92538 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
GBF1Q92538 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GBF1Q92538 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
GBF1Q92538 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
GBF1Q92538 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.31■■□□□ 1.64
GBF1Q92538 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.31■■□□□ 1.64
GBF1Q92538 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
GBF1Q92538 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
GBF1Q92538 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
GBF1Q92538 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
GBF1Q92538 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.3■■□□□ 1.64
GBF1Q92538 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
GBF1Q92538 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.3■■□□□ 1.64
GBF1Q92538 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.3■■□□□ 1.64
GBF1Q92538 MIR6722-201ENST00000617286 78 ntBASIC25.3■■□□□ 1.64
GBF1Q92538 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
GBF1Q92538 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
GBF1Q92538 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.28■■□□□ 1.64
GBF1Q92538 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
GBF1Q92538 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
GBF1Q92538 DUX4L19-201ENST00000557448 1267 ntBASIC25.28■■□□□ 1.64
GBF1Q92538 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
GBF1Q92538 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
GBF1Q92538 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
GBF1Q92538 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.28■■□□□ 1.64
GBF1Q92538 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
GBF1Q92538 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
GBF1Q92538 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
GBF1Q92538 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.27■■□□□ 1.64
GBF1Q92538 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.27■■□□□ 1.64
GBF1Q92538 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.27■■□□□ 1.64
GBF1Q92538 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.26■■□□□ 1.63
GBF1Q92538 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.26■■□□□ 1.63
GBF1Q92538 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.26■■□□□ 1.63
GBF1Q92538 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
GBF1Q92538 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.26■■□□□ 1.63
GBF1Q92538 SRD5A1P1-201ENST00000442297 786 ntBASIC25.26■■□□□ 1.63
GBF1Q92538 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GBF1Q92538 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.25■■□□□ 1.63
GBF1Q92538 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GBF1Q92538 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GBF1Q92538 CA15P2-201ENST00000611168 834 ntBASIC25.25■■□□□ 1.63
GBF1Q92538 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
GBF1Q92538 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GBF1Q92538 AC034268.1-201ENST00000441047 882 ntBASIC25.24■■□□□ 1.63
GBF1Q92538 RARRES2P11-201ENST00000635158 484 ntBASIC25.24■■□□□ 1.63
GBF1Q92538 RASA4CP-201ENST00000424092 1398 ntBASIC25.24■■□□□ 1.63
GBF1Q92538 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms