Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN3P26045 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN3P26045 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PTPN3P26045 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN3P26045 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN3P26045 HLA-L-211ENST00000482052 1765 ntBASIC23.85■■□□□ 1.41
PTPN3P26045 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN3P26045 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.85■■□□□ 1.41
PTPN3P26045 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PTPN3P26045 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.84■■□□□ 1.41
PTPN3P26045 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN3P26045 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.84■■□□□ 1.41
PTPN3P26045 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.84■■□□□ 1.41
PTPN3P26045 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.84■■□□□ 1.41
PTPN3P26045 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.84■■□□□ 1.41
PTPN3P26045 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN3P26045 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 LINC00543-201ENST00000567234 1845 ntBASIC23.83■■□□□ 1.41
PTPN3P26045 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTPN3P26045 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 AC019171.1-201ENST00000601251 1056 ntBASIC23.83■■□□□ 1.41
PTPN3P26045 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN3P26045 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
PTPN3P26045 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.82■■□□□ 1.4
PTPN3P26045 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
PTPN3P26045 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.82■■□□□ 1.4
PTPN3P26045 AC012354.3-201ENST00000623734 483 ntBASIC23.82■■□□□ 1.4
PTPN3P26045 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.82■■□□□ 1.4
PTPN3P26045 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN3P26045 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN3P26045 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
PTPN3P26045 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN3P26045 AC090877.2-201ENST00000558441 1738 ntBASIC23.81■■□□□ 1.4
PTPN3P26045 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPN3P26045 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTPN3P26045 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN3P26045 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN3P26045 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN3P26045 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPN3P26045 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.8■■□□□ 1.4
PTPN3P26045 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN3P26045 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPN3P26045 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.8■■□□□ 1.4
PTPN3P26045 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN3P26045 BHLHE23-202ENST00000612929 1109 ntBASIC23.8■■□□□ 1.4
PTPN3P26045 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN3P26045 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN3P26045 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PTPN3P26045 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN3P26045 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPN3P26045 AC141586.4-201ENST00000624558 1573 ntBASIC23.78■■□□□ 1.4
PTPN3P26045 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 PVT1_1.1-201ENST00000615125 194 ntBASIC23.78■■□□□ 1.4
PTPN3P26045 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN3P26045 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN3P26045 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN3P26045 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.77■■□□□ 1.4
PTPN3P26045 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN3P26045 AL033527.3-201ENST00000566366 1196 ntBASIC23.77■■□□□ 1.4
PTPN3P26045 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN3P26045 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PTPN3P26045 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN3P26045 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.39
PTPN3P26045 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
PTPN3P26045 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN3P26045 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN3P26045 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.76■■□□□ 1.39
PTPN3P26045 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
PTPN3P26045 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN3P26045 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN3P26045 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PTPN3P26045 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN3P26045 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.75■■□□□ 1.39
PTPN3P26045 AC010980.1-201ENST00000587192 1142 ntBASIC23.75■■□□□ 1.39
PTPN3P26045 AC074183.2-201ENST00000623112 922 ntBASIC23.75■■□□□ 1.39
PTPN3P26045 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN3P26045 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN3P26045 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN3P26045 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN3P26045 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.74■■□□□ 1.39
PTPN3P26045 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN3P26045 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN3P26045 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.74■■□□□ 1.39
PTPN3P26045 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.74■■□□□ 1.39
PTPN3P26045 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN3P26045 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
PTPN3P26045 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN3P26045 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms