Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APCP25054 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APCP25054 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
APCP25054 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APCP25054 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APCP25054 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APCP25054 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APCP25054 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.05■□□□□ 0.8
APCP25054 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APCP25054 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APCP25054 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.05■□□□□ 0.8
APCP25054 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.05■□□□□ 0.8
APCP25054 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.05■□□□□ 0.8
APCP25054 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APCP25054 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APCP25054 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.04■□□□□ 0.8
APCP25054 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APCP25054 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.04■□□□□ 0.8
APCP25054 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APCP25054 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.04■□□□□ 0.8
APCP25054 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
APCP25054 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.04■□□□□ 0.8
APCP25054 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.04■□□□□ 0.8
APCP25054 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.04■□□□□ 0.8
APCP25054 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APCP25054 SERBP1P1-201ENST00000396021 1160 ntBASIC20.03■□□□□ 0.8
APCP25054 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APCP25054 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APCP25054 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APCP25054 AC011298.3-201ENST00000615796 283 ntBASIC20.03■□□□□ 0.8
APCP25054 MIR6722-201ENST00000617286 78 ntBASIC20.03■□□□□ 0.8
APCP25054 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
APCP25054 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
APCP25054 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APCP25054 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
APCP25054 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APCP25054 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APCP25054 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APCP25054 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.02■□□□□ 0.8
APCP25054 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.02■□□□□ 0.79
APCP25054 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
APCP25054 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APCP25054 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APCP25054 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.01■□□□□ 0.79
APCP25054 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
APCP25054 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APCP25054 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
APCP25054 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20■□□□□ 0.79
APCP25054 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20■□□□□ 0.79
APCP25054 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
APCP25054 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
APCP25054 AC099791.1-201ENST00000416440 715 ntBASIC20■□□□□ 0.79
APCP25054 HLA-L-209ENST00000420110 1011 ntBASIC20■□□□□ 0.79
APCP25054 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APCP25054 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APCP25054 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.99■□□□□ 0.79
APCP25054 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APCP25054 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APCP25054 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APCP25054 DUX4L2-201ENST00000561772 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
APCP25054 DUX4L6-201ENST00000626483 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4L1-201ENST00000627662 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4L8-201ENST00000629013 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4L3-201ENST00000630187 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4L7-201ENST00000630678 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 DUX4L5-201ENST00000630834 1275 ntBASIC19.99■□□□□ 0.79
APCP25054 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
APCP25054 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
APCP25054 ABHD17AP1-201ENST00000358206 933 ntBASIC19.98■□□□□ 0.79
APCP25054 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.98■□□□□ 0.79
APCP25054 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APCP25054 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
APCP25054 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.98■□□□□ 0.79
APCP25054 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
APCP25054 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APCP25054 YBX1P1-201ENST00000445822 960 ntBASIC19.97■□□□□ 0.79
APCP25054 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.97■□□□□ 0.79
APCP25054 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.97■□□□□ 0.79
APCP25054 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APCP25054 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
APCP25054 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.97■□□□□ 0.79
APCP25054 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APCP25054 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.97■□□□□ 0.79
APCP25054 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.97■□□□□ 0.79
APCP25054 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APCP25054 RAP2CP1-201ENST00000605103 478 ntBASIC19.97■□□□□ 0.79
APCP25054 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APCP25054 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
APCP25054 AL138724.1-201ENST00000606771 1088 ntBASIC19.96■□□□□ 0.79
APCP25054 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.96■□□□□ 0.79
APCP25054 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APCP25054 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
APCP25054 AC004911.1-201ENST00000416316 871 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms