Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A2P08123 SNX5-217ENST00000606557 1087 ntBASIC25.91■■□□□ 1.74
COL1A2P08123 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.91■■□□□ 1.74
COL1A2P08123 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A2P08123 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.9■■□□□ 1.74
COL1A2P08123 AC145676.1-201ENST00000514988 2004 ntBASIC25.9■■□□□ 1.74
COL1A2P08123 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.9■■□□□ 1.74
COL1A2P08123 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.9■■□□□ 1.74
COL1A2P08123 AC008406.3-201ENST00000620001 1374 ntBASIC25.9■■□□□ 1.74
COL1A2P08123 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A2P08123 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL1A2P08123 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COL1A2P08123 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.89■■□□□ 1.74
COL1A2P08123 AL117332.1-201ENST00000622628 974 ntBASIC25.89■■□□□ 1.74
COL1A2P08123 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.89■■□□□ 1.73
COL1A2P08123 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL1A2P08123 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A2P08123 MIR3621-201ENST00000580529 85 ntBASIC25.86■■□□□ 1.73
COL1A2P08123 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL1A2P08123 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A2P08123 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A2P08123 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.85■■□□□ 1.73
COL1A2P08123 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.85■■□□□ 1.73
COL1A2P08123 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.85■■□□□ 1.73
COL1A2P08123 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.85■■□□□ 1.73
COL1A2P08123 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.84■■□□□ 1.73
COL1A2P08123 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A2P08123 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.84■■□□□ 1.73
COL1A2P08123 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.84■■□□□ 1.73
COL1A2P08123 MIR6089-201ENST00000616698 64 ntBASIC25.84■■□□□ 1.73
COL1A2P08123 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.84■■□□□ 1.73
COL1A2P08123 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
COL1A2P08123 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
COL1A2P08123 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.84■■□□□ 1.73
COL1A2P08123 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
COL1A2P08123 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.83■■□□□ 1.73
COL1A2P08123 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.83■■□□□ 1.73
COL1A2P08123 MIR6722-201ENST00000617286 78 ntBASIC25.83■■□□□ 1.73
COL1A2P08123 SLC6A10P-202ENST00000431994 2058 ntBASIC25.83■■□□□ 1.73
COL1A2P08123 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
COL1A2P08123 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A2P08123 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A2P08123 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A2P08123 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A2P08123 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.82■■□□□ 1.72
COL1A2P08123 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.82■■□□□ 1.72
COL1A2P08123 AC131281.2-201ENST00000520478 145 ntBASIC25.82■■□□□ 1.72
COL1A2P08123 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A2P08123 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
COL1A2P08123 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.82■■□□□ 1.72
COL1A2P08123 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.82■■□□□ 1.72
COL1A2P08123 AL356740.2-201ENST00000601559 647 ntBASIC25.82■■□□□ 1.72
COL1A2P08123 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.81■■□□□ 1.72
COL1A2P08123 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
COL1A2P08123 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
COL1A2P08123 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.81■■□□□ 1.72
COL1A2P08123 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.8■■□□□ 1.72
COL1A2P08123 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A2P08123 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.8■■□□□ 1.72
COL1A2P08123 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A2P08123 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.8■■□□□ 1.72
COL1A2P08123 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.8■■□□□ 1.72
COL1A2P08123 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A2P08123 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A2P08123 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A2P08123 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
COL1A2P08123 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.79■■□□□ 1.72
COL1A2P08123 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.78■■□□□ 1.72
COL1A2P08123 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.78■■□□□ 1.72
COL1A2P08123 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.78■■□□□ 1.72
COL1A2P08123 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.78■■□□□ 1.72
COL1A2P08123 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.78■■□□□ 1.72
COL1A2P08123 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL1A2P08123 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A2P08123 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A2P08123 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.76■■□□□ 1.71
COL1A2P08123 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.76■■□□□ 1.71
COL1A2P08123 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.76■■□□□ 1.71
COL1A2P08123 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.76■■□□□ 1.71
COL1A2P08123 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
COL1A2P08123 AC004448.1-201ENST00000458332 883 ntBASIC25.76■■□□□ 1.71
COL1A2P08123 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.76■■□□□ 1.71
COL1A2P08123 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.76■■□□□ 1.71
COL1A2P08123 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.76■■□□□ 1.71
COL1A2P08123 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A2P08123 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
COL1A2P08123 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
COL1A2P08123 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL1A2P08123 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
COL1A2P08123 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms