Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CAPNS1P04632 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPNS1P04632 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CAPNS1P04632 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPNS1P04632 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CAPNS1P04632 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.17■■□□□ 1.3
CAPNS1P04632 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.17■■□□□ 1.3
CAPNS1P04632 AC021242.3-201ENST00000607598 1377 ntBASIC23.16■■□□□ 1.3
CAPNS1P04632 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPNS1P04632 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.16■■□□□ 1.3
CAPNS1P04632 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.16■■□□□ 1.3
CAPNS1P04632 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.16■■□□□ 1.3
CAPNS1P04632 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CAPNS1P04632 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CAPNS1P04632 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CAPNS1P04632 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CAPNS1P04632 AP004609.3-201ENST00000610705 1884 ntBASIC23.15■■□□□ 1.3
CAPNS1P04632 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPNS1P04632 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.15■■□□□ 1.3
CAPNS1P04632 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.15■■□□□ 1.3
CAPNS1P04632 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPNS1P04632 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CAPNS1P04632 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPNS1P04632 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.15■■□□□ 1.3
CAPNS1P04632 ZNRF2P3-201ENST00000424200 374 ntBASIC23.15■■□□□ 1.3
CAPNS1P04632 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPNS1P04632 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CAPNS1P04632 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPNS1P04632 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPNS1P04632 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CAPNS1P04632 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CAPNS1P04632 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.14■■□□□ 1.29
CAPNS1P04632 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.14■■□□□ 1.29
CAPNS1P04632 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.14■■□□□ 1.29
CAPNS1P04632 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CAPNS1P04632 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.14■■□□□ 1.29
CAPNS1P04632 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPNS1P04632 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPNS1P04632 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CAPNS1P04632 AL359504.2-201ENST00000605506 1601 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 KRT18P24-201ENST00000344739 1156 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.13■■□□□ 1.29
CAPNS1P04632 AC096631.2-201ENST00000436136 790 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 TSPY9P-201ENST00000440215 945 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 TSPY11P-201ENST00000442607 1045 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CAPNS1P04632 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.13■■□□□ 1.29
CAPNS1P04632 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CAPNS1P04632 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPNS1P04632 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
CAPNS1P04632 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPNS1P04632 AL139125.2-201ENST00000623134 1869 ntBASIC23.13■■□□□ 1.29
CAPNS1P04632 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CAPNS1P04632 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.12■■□□□ 1.29
CAPNS1P04632 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.12■■□□□ 1.29
CAPNS1P04632 AC022616.5-201ENST00000518796 181 ntBASIC23.12■■□□□ 1.29
CAPNS1P04632 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.12■■□□□ 1.29
CAPNS1P04632 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.12■■□□□ 1.29
CAPNS1P04632 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPNS1P04632 AC012676.1-201ENST00000574705 1949 ntBASIC23.12■■□□□ 1.29
CAPNS1P04632 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CAPNS1P04632 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CAPNS1P04632 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CAPNS1P04632 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CAPNS1P04632 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CAPNS1P04632 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.11■■□□□ 1.29
CAPNS1P04632 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
CAPNS1P04632 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.11■■□□□ 1.29
CAPNS1P04632 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
CAPNS1P04632 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.1■■□□□ 1.29
CAPNS1P04632 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.1■■□□□ 1.29
CAPNS1P04632 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPNS1P04632 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.1■■□□□ 1.29
CAPNS1P04632 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPNS1P04632 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.09■■□□□ 1.29
CAPNS1P04632 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.09■■□□□ 1.29
CAPNS1P04632 MIR3621-201ENST00000580529 85 ntBASIC23.09■■□□□ 1.29
CAPNS1P04632 AC104564.3-201ENST00000582367 638 ntBASIC23.09■■□□□ 1.29
CAPNS1P04632 AL117332.1-201ENST00000622628 974 ntBASIC23.09■■□□□ 1.29
CAPNS1P04632 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPNS1P04632 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CAPNS1P04632 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPNS1P04632 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CAPNS1P04632 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CAPNS1P04632 AC133561.1-201ENST00000568600 2415 ntBASIC23.08■■□□□ 1.29
CAPNS1P04632 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.08■■□□□ 1.29
CAPNS1P04632 AC092028.1-203ENST00000608262 953 ntBASIC23.08■■□□□ 1.29
CAPNS1P04632 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.08■■□□□ 1.29
CAPNS1P04632 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms