Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TCRAP04437 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRAP04437 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TCRAP04437 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TCRAP04437 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 C9orf163-202ENST00000624034 2573 ntBASIC17.7■□□□□ 0.42
TCRAP04437 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRAP04437 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRAP04437 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRAP04437 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRAP04437 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TCRAP04437 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TCRAP04437 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRAP04437 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TCRAP04437 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRAP04437 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRAP04437 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRAP04437 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRAP04437 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRAP04437 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRAP04437 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRAP04437 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRAP04437 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRAP04437 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRAP04437 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRAP04437 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRAP04437 MIR3960-201ENST00000583311 91 ntBASIC17.67■□□□□ 0.42
TCRAP04437 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TCRAP04437 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRAP04437 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TCRAP04437 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 AC025884.2-201ENST00000553429 711 ntBASIC17.66■□□□□ 0.42
TCRAP04437 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRAP04437 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TCRAP04437 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRAP04437 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.65■□□□□ 0.42
TCRAP04437 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRAP04437 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRAP04437 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRAP04437 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.65■□□□□ 0.42
TCRAP04437 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TCRAP04437 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRAP04437 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TCRAP04437 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.64■□□□□ 0.41
TCRAP04437 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TCRAP04437 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TCRAP04437 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TCRAP04437 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 AL157400.5-201ENST00000507624 621 ntBASIC17.63■□□□□ 0.41
TCRAP04437 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.63■□□□□ 0.41
TCRAP04437 CR559946.2-201ENST00000623684 991 ntBASIC17.63■□□□□ 0.41
TCRAP04437 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TCRAP04437 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TCRAP04437 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TCRAP04437 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
TCRAP04437 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms