Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.43■□□□□ 0.86
UPK1BO75841 AL137060.1-201ENST00000618151 2648 ntBASIC20.43■□□□□ 0.86
UPK1BO75841 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.43■□□□□ 0.86
UPK1BO75841 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1BO75841 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1BO75841 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
UPK1BO75841 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1BO75841 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.42■□□□□ 0.86
UPK1BO75841 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1BO75841 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1BO75841 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
UPK1BO75841 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UPK1BO75841 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.42■□□□□ 0.86
UPK1BO75841 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
UPK1BO75841 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.41■□□□□ 0.86
UPK1BO75841 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1BO75841 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1BO75841 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.41■□□□□ 0.86
UPK1BO75841 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPK1BO75841 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1BO75841 AL121603.2-201ENST00000557373 2117 ntBASIC20.41■□□□□ 0.86
UPK1BO75841 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1BO75841 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1BO75841 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1BO75841 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1BO75841 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.4■□□□□ 0.86
UPK1BO75841 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.4■□□□□ 0.86
UPK1BO75841 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1BO75841 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.4■□□□□ 0.86
UPK1BO75841 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1BO75841 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.39■□□□□ 0.86
UPK1BO75841 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPK1BO75841 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.39■□□□□ 0.86
UPK1BO75841 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPK1BO75841 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPK1BO75841 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UPK1BO75841 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UPK1BO75841 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
UPK1BO75841 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1BO75841 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1BO75841 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
UPK1BO75841 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.38■□□□□ 0.85
UPK1BO75841 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1BO75841 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1BO75841 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.37■□□□□ 0.85
UPK1BO75841 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UPK1BO75841 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UPK1BO75841 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.37■□□□□ 0.85
UPK1BO75841 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.37■□□□□ 0.85
UPK1BO75841 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPK1BO75841 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPK1BO75841 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPK1BO75841 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.36■□□□□ 0.85
UPK1BO75841 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.36■□□□□ 0.85
UPK1BO75841 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPK1BO75841 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UPK1BO75841 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UPK1BO75841 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
UPK1BO75841 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPK1BO75841 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
UPK1BO75841 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UPK1BO75841 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UPK1BO75841 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPK1BO75841 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPK1BO75841 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UPK1BO75841 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UPK1BO75841 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPK1BO75841 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPK1BO75841 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.34■□□□□ 0.85
UPK1BO75841 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPK1BO75841 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPK1BO75841 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPK1BO75841 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
UPK1BO75841 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPK1BO75841 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPK1BO75841 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.33■□□□□ 0.85
UPK1BO75841 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPK1BO75841 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
UPK1BO75841 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.32■□□□□ 0.84
UPK1BO75841 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPK1BO75841 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms