Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAF2O60831 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRAF2O60831 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAF2O60831 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAF2O60831 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAF2O60831 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAF2O60831 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAF2O60831 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAF2O60831 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAF2O60831 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PRAF2O60831 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAF2O60831 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PRAF2O60831 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAF2O60831 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PRAF2O60831 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAF2O60831 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAF2O60831 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PRAF2O60831 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PRAF2O60831 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAF2O60831 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAF2O60831 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAF2O60831 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAF2O60831 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAF2O60831 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAF2O60831 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRAF2O60831 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 C1orf229-201ENST00000623686 2258 ntBASIC19.68■□□□□ 0.74
PRAF2O60831 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAF2O60831 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRAF2O60831 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAF2O60831 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAF2O60831 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAF2O60831 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAF2O60831 MIR762-201ENST00000390236 83 ntBASIC19.67■□□□□ 0.74
PRAF2O60831 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PRAF2O60831 RARRES2P7-201ENST00000567349 469 ntBASIC19.67■□□□□ 0.74
PRAF2O60831 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAF2O60831 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PRAF2O60831 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAF2O60831 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAF2O60831 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAF2O60831 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAF2O60831 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAF2O60831 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PRAF2O60831 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAF2O60831 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAF2O60831 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAF2O60831 MIR6089-201ENST00000616698 64 ntBASIC19.66■□□□□ 0.74
PRAF2O60831 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAF2O60831 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAF2O60831 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAF2O60831 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAF2O60831 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.65■□□□□ 0.74
PRAF2O60831 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PRAF2O60831 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAF2O60831 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAF2O60831 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAF2O60831 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
PRAF2O60831 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PRAF2O60831 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAF2O60831 CAHM-201ENST00000604200 896 ntBASIC19.64■□□□□ 0.73
PRAF2O60831 MIR6090-201ENST00000622481 60 ntBASIC19.64■□□□□ 0.73
PRAF2O60831 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAF2O60831 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAF2O60831 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAF2O60831 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAF2O60831 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAF2O60831 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAF2O60831 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAF2O60831 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAF2O60831 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAF2O60831 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAF2O60831 ECEL1P1-201ENST00000373592 1742 ntBASIC19.63■□□□□ 0.73
PRAF2O60831 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAF2O60831 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAF2O60831 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRAF2O60831 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAF2O60831 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRAF2O60831 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAF2O60831 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAF2O60831 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAF2O60831 GUSBP5-202ENST00000510805 1989 ntBASIC19.62■□□□□ 0.73
PRAF2O60831 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PRAF2O60831 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PRAF2O60831 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAF2O60831 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAF2O60831 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAF2O60831 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAF2O60831 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAF2O60831 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.61■□□□□ 0.73
PRAF2O60831 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.61■□□□□ 0.73
PRAF2O60831 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAF2O60831 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAF2O60831 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAF2O60831 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAF2O60831 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms