Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNAI2O43623 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNAI2O43623 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNAI2O43623 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNAI2O43623 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNAI2O43623 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.29■□□□□ 0.36
SNAI2O43623 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.29■□□□□ 0.36
SNAI2O43623 AC126177.7-201ENST00000547904 679 ntBASIC17.29■□□□□ 0.36
SNAI2O43623 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNAI2O43623 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.29■□□□□ 0.36
SNAI2O43623 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.29■□□□□ 0.36
SNAI2O43623 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.29■□□□□ 0.36
SNAI2O43623 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.29■□□□□ 0.36
SNAI2O43623 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.28■□□□□ 0.36
SNAI2O43623 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNAI2O43623 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNAI2O43623 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNAI2O43623 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.28■□□□□ 0.36
SNAI2O43623 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.28■□□□□ 0.36
SNAI2O43623 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.28■□□□□ 0.36
SNAI2O43623 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNAI2O43623 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNAI2O43623 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SNAI2O43623 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SNAI2O43623 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNAI2O43623 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNAI2O43623 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNAI2O43623 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SNAI2O43623 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNAI2O43623 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNAI2O43623 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNAI2O43623 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SNAI2O43623 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.26■□□□□ 0.35
SNAI2O43623 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.26■□□□□ 0.35
SNAI2O43623 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.26■□□□□ 0.35
SNAI2O43623 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.26■□□□□ 0.35
SNAI2O43623 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.26■□□□□ 0.35
SNAI2O43623 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.26■□□□□ 0.35
SNAI2O43623 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNAI2O43623 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SNAI2O43623 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNAI2O43623 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.25■□□□□ 0.35
SNAI2O43623 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNAI2O43623 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SNAI2O43623 MIR6089-201ENST00000616698 64 ntBASIC17.25■□□□□ 0.35
SNAI2O43623 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.25■□□□□ 0.35
SNAI2O43623 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNAI2O43623 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNAI2O43623 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNAI2O43623 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNAI2O43623 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.24■□□□□ 0.35
SNAI2O43623 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNAI2O43623 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNAI2O43623 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNAI2O43623 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SNAI2O43623 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.23■□□□□ 0.35
SNAI2O43623 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNAI2O43623 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNAI2O43623 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.23■□□□□ 0.35
SNAI2O43623 DUSP8P5-201ENST00000422884 1815 ntBASIC17.23■□□□□ 0.35
SNAI2O43623 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNAI2O43623 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNAI2O43623 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAI2O43623 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.22■□□□□ 0.35
SNAI2O43623 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAI2O43623 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAI2O43623 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SNAI2O43623 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms