Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB4C9JG80 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB4C9JG80 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 AL161729.1-201ENST00000604104 1402 ntBASIC20.73■□□□□ 0.91
NPIPB4C9JG80 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 AC074183.2-201ENST00000623112 922 ntBASIC20.73■□□□□ 0.91
NPIPB4C9JG80 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB4C9JG80 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 AC139795.1-202ENST00000500444 432 ntBASIC20.72■□□□□ 0.91
NPIPB4C9JG80 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.72■□□□□ 0.91
NPIPB4C9JG80 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
NPIPB4C9JG80 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 ATP5G2P3-201ENST00000429083 425 ntBASIC20.71■□□□□ 0.91
NPIPB4C9JG80 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NPIPB4C9JG80 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NPIPB4C9JG80 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB4C9JG80 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 AC004987.1-201ENST00000428627 508 ntBASIC20.69■□□□□ 0.9
NPIPB4C9JG80 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
NPIPB4C9JG80 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 TSPY13P-201ENST00000338964 914 ntBASIC20.68■□□□□ 0.9
NPIPB4C9JG80 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 DUX4L18-201ENST00000553347 1267 ntBASIC20.68■□□□□ 0.9
NPIPB4C9JG80 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NPIPB4C9JG80 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB4C9JG80 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NPIPB4C9JG80 AC004812.2-201ENST00000611079 2094 ntBASIC20.65■□□□□ 0.9
NPIPB4C9JG80 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPB4C9JG80 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPB4C9JG80 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms