Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00959A0A1B0GUT2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00959A0A1B0GUT2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
LINC00959A0A1B0GUT2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LINC00959A0A1B0GUT2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 GPX1-201ENST00000419349 1106 ntBASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00959A0A1B0GUT2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00959A0A1B0GUT2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 MIR4449-201ENST00000578365 66 ntBASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00959A0A1B0GUT2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.83■□□□□ 0.13
LINC00959A0A1B0GUT2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LINC00959A0A1B0GUT2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC00959A0A1B0GUT2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 ABCB10P4-201ENST00000566803 2184 ntBASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00959A0A1B0GUT2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00959A0A1B0GUT2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LINC00959A0A1B0GUT2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00959A0A1B0GUT2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LINC00959A0A1B0GUT2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00959A0A1B0GUT2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00959A0A1B0GUT2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC00959A0A1B0GUT2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 AC133552.2-201ENST00000619106 1032 ntBASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00959A0A1B0GUT2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms