Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 AC141586.4-201ENST00000624558 1573 ntBASIC19.06■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 HLA-L-211ENST00000482052 1765 ntBASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 NTF6A-201ENST00000591175 560 ntBASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.04■□□□□ 0.64
SAA2-SAA4A0A096LPE2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SAA2-SAA4A0A096LPE2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SAA2-SAA4A0A096LPE2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.03■□□□□ 0.64
SAA2-SAA4A0A096LPE2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.03■□□□□ 0.64
SAA2-SAA4A0A096LPE2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SAA2-SAA4A0A096LPE2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.02■□□□□ 0.63
SAA2-SAA4A0A096LPE2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SAA2-SAA4A0A096LPE2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 AL592295.1-201ENST00000400984 884 ntBASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 LONRF2P2-201ENST00000439212 571 ntBASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA2-SAA4A0A096LPE2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.98■□□□□ 0.63
SAA2-SAA4A0A096LPE2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 AC090877.2-201ENST00000558441 1738 ntBASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 DUX4L18-201ENST00000553347 1267 ntBASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
SAA2-SAA4A0A096LPE2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms