Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.68■■□□□ 1.06
HPF1Q9NWY4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 AC011551.1-201ENST00000614101 683 ntBASIC21.68■■□□□ 1.06
HPF1Q9NWY4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPF1Q9NWY4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.67■■□□□ 1.06
HPF1Q9NWY4 AC091060.1-201ENST00000623524 1766 ntBASIC21.67■■□□□ 1.06
HPF1Q9NWY4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 KRT125P-201ENST00000546827 989 ntBASIC21.67■■□□□ 1.06
HPF1Q9NWY4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.67■■□□□ 1.06
HPF1Q9NWY4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
HPF1Q9NWY4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.66■■□□□ 1.06
HPF1Q9NWY4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 AC145676.1-201ENST00000514988 2004 ntBASIC21.65■■□□□ 1.06
HPF1Q9NWY4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HPF1Q9NWY4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HPF1Q9NWY4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 GUSBP5-201ENST00000418136 578 ntBASIC21.64■■□□□ 1.05
HPF1Q9NWY4 MIR4281-201ENST00000580852 62 ntBASIC21.64■■□□□ 1.05
HPF1Q9NWY4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HPF1Q9NWY4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HPF1Q9NWY4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 AC137630.3-201ENST00000607245 391 ntBASIC21.62■■□□□ 1.05
HPF1Q9NWY4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HPF1Q9NWY4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPF1Q9NWY4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HPF1Q9NWY4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HPF1Q9NWY4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
HPF1Q9NWY4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HPF1Q9NWY4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HPF1Q9NWY4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 MIR4787-201ENST00000607364 84 ntBASIC21.59■■□□□ 1.05
HPF1Q9NWY4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HPF1Q9NWY4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.58■■□□□ 1.05
HPF1Q9NWY4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms