Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 AC141586.4-201ENST00000624558 1573 ntBASIC25.61■■□□□ 1.69
NDST4Q9H3R1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NDST4Q9H3R1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NDST4Q9H3R1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.59■■□□□ 1.69
NDST4Q9H3R1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NDST4Q9H3R1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.59■■□□□ 1.69
NDST4Q9H3R1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.59■■□□□ 1.69
NDST4Q9H3R1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.58■■□□□ 1.69
NDST4Q9H3R1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
NDST4Q9H3R1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NDST4Q9H3R1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NDST4Q9H3R1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
NDST4Q9H3R1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
NDST4Q9H3R1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NDST4Q9H3R1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NDST4Q9H3R1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
NDST4Q9H3R1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 HLA-L-211ENST00000482052 1765 ntBASIC25.53■■□□□ 1.68
NDST4Q9H3R1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NDST4Q9H3R1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
NDST4Q9H3R1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.52■■□□□ 1.68
NDST4Q9H3R1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
NDST4Q9H3R1 AC004812.2-201ENST00000611079 2094 ntBASIC25.51■■□□□ 1.67
NDST4Q9H3R1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 AL592293.1-201ENST00000502889 1188 ntBASIC25.51■■□□□ 1.67
NDST4Q9H3R1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.51■■□□□ 1.67
NDST4Q9H3R1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.5■■□□□ 1.67
NDST4Q9H3R1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 SPCS2P3-201ENST00000500401 656 ntBASIC25.49■■□□□ 1.67
NDST4Q9H3R1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NDST4Q9H3R1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 RPS2P7-201ENST00000447334 885 ntBASIC25.48■■□□□ 1.67
NDST4Q9H3R1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NDST4Q9H3R1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
NDST4Q9H3R1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.46■■□□□ 1.67
NDST4Q9H3R1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
NDST4Q9H3R1 AC018755.3-202ENST00000596210 929 ntBASIC25.46■■□□□ 1.67
NDST4Q9H3R1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms