Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NUCKS1Q9H1E3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NUCKS1Q9H1E3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
NUCKS1Q9H1E3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NUCKS1Q9H1E3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NUCKS1Q9H1E3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.35■■□□□ 1.65
NUCKS1Q9H1E3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NUCKS1Q9H1E3 AC009831.1-201ENST00000580420 1582 ntBASIC25.35■■□□□ 1.65
NUCKS1Q9H1E3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.34■■□□□ 1.65
NUCKS1Q9H1E3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.34■■□□□ 1.65
NUCKS1Q9H1E3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NUCKS1Q9H1E3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.33■■□□□ 1.65
NUCKS1Q9H1E3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NUCKS1Q9H1E3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NUCKS1Q9H1E3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.33■■□□□ 1.65
NUCKS1Q9H1E3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
NUCKS1Q9H1E3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
NUCKS1Q9H1E3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 AC026202.3-201ENST00000600805 1127 ntBASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 RAP2CP1-202ENST00000605179 643 ntBASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
NUCKS1Q9H1E3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUCKS1Q9H1E3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 AC133552.2-201ENST00000619106 1032 ntBASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.3■■□□□ 1.64
NUCKS1Q9H1E3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUCKS1Q9H1E3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 KRT18P60-201ENST00000312876 1297 ntBASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
NUCKS1Q9H1E3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.27■■□□□ 1.64
NUCKS1Q9H1E3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.27■■□□□ 1.64
NUCKS1Q9H1E3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 FOXO3B-201ENST00000395675 1928 ntBASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 AL592293.1-201ENST00000502889 1188 ntBASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUCKS1Q9H1E3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
NUCKS1Q9H1E3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
NUCKS1Q9H1E3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
NUCKS1Q9H1E3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
NUCKS1Q9H1E3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.24■■□□□ 1.63
NUCKS1Q9H1E3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.24■■□□□ 1.63
NUCKS1Q9H1E3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms