Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARXQ96QS3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.65■■■□□ 2.5
ARXQ96QS3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARXQ96QS3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.65■■■□□ 2.5
ARXQ96QS3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ARXQ96QS3 AL512631.2-201ENST00000604634 923 ntBASIC30.65■■■□□ 2.5
ARXQ96QS3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARXQ96QS3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
ARXQ96QS3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.64■■■□□ 2.5
ARXQ96QS3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
ARXQ96QS3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.63■■■□□ 2.49
ARXQ96QS3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARXQ96QS3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARXQ96QS3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARXQ96QS3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.62■■■□□ 2.49
ARXQ96QS3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARXQ96QS3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARXQ96QS3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
ARXQ96QS3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARXQ96QS3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.61■■■□□ 2.49
ARXQ96QS3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARXQ96QS3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.61■■■□□ 2.49
ARXQ96QS3 MTDHP2-201ENST00000601468 714 ntBASIC30.61■■■□□ 2.49
ARXQ96QS3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
ARXQ96QS3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARXQ96QS3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARXQ96QS3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ARXQ96QS3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
ARXQ96QS3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ARXQ96QS3 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.6■■■□□ 2.49
ARXQ96QS3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
ARXQ96QS3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARXQ96QS3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.58■■■□□ 2.49
ARXQ96QS3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.58■■■□□ 2.49
ARXQ96QS3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARXQ96QS3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
ARXQ96QS3 SUDS3P1-201ENST00000505831 966 ntBASIC30.58■■■□□ 2.49
ARXQ96QS3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARXQ96QS3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARXQ96QS3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARXQ96QS3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARXQ96QS3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARXQ96QS3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARXQ96QS3 AL031432.3-201ENST00000607698 485 ntBASIC30.57■■■□□ 2.48
ARXQ96QS3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARXQ96QS3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARXQ96QS3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.56■■■□□ 2.48
ARXQ96QS3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.56■■■□□ 2.48
ARXQ96QS3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
ARXQ96QS3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
ARXQ96QS3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
ARXQ96QS3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.55■■■□□ 2.48
ARXQ96QS3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.55■■■□□ 2.48
ARXQ96QS3 AL121749.1-202ENST00000609313 2153 ntBASIC30.54■■■□□ 2.48
ARXQ96QS3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
ARXQ96QS3 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.54■■■□□ 2.48
ARXQ96QS3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARXQ96QS3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.54■■■□□ 2.48
ARXQ96QS3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.54■■■□□ 2.48
ARXQ96QS3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARXQ96QS3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.53■■■□□ 2.48
ARXQ96QS3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARXQ96QS3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.53■■■□□ 2.48
ARXQ96QS3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARXQ96QS3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARXQ96QS3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.52■■■□□ 2.48
ARXQ96QS3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ARXQ96QS3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ARXQ96QS3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.52■■■□□ 2.48
ARXQ96QS3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.52■■■□□ 2.48
ARXQ96QS3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.52■■■□□ 2.48
ARXQ96QS3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.52■■■□□ 2.48
ARXQ96QS3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
ARXQ96QS3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARXQ96QS3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARXQ96QS3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARXQ96QS3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.51■■■□□ 2.47
ARXQ96QS3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.5■■■□□ 2.47
ARXQ96QS3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARXQ96QS3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ARXQ96QS3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.5■■■□□ 2.47
ARXQ96QS3 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.5■■■□□ 2.47
ARXQ96QS3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.5■■■□□ 2.47
ARXQ96QS3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.5■■■□□ 2.47
ARXQ96QS3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARXQ96QS3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ARXQ96QS3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ARXQ96QS3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC30.49■■■□□ 2.47
ARXQ96QS3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.49■■■□□ 2.47
ARXQ96QS3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARXQ96QS3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
ARXQ96QS3 MIR4281-201ENST00000580852 62 ntBASIC30.49■■■□□ 2.47
ARXQ96QS3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.49■■■□□ 2.47
ARXQ96QS3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.48■■■□□ 2.47
ARXQ96QS3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms