Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RETREG2Q8NC44 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RETREG2Q8NC44 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.6■■□□□ 1.85
RETREG2Q8NC44 UNC93B8-201ENST00000511903 705 ntBASIC26.6■■□□□ 1.85
RETREG2Q8NC44 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RETREG2Q8NC44 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RETREG2Q8NC44 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RETREG2Q8NC44 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RETREG2Q8NC44 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RETREG2Q8NC44 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
RETREG2Q8NC44 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RETREG2Q8NC44 AC010501.1-201ENST00000606270 1962 ntBASIC26.58■■□□□ 1.85
RETREG2Q8NC44 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.58■■□□□ 1.85
RETREG2Q8NC44 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.58■■□□□ 1.85
RETREG2Q8NC44 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.84
RETREG2Q8NC44 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RETREG2Q8NC44 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RETREG2Q8NC44 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RETREG2Q8NC44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
RETREG2Q8NC44 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.56■■□□□ 1.84
RETREG2Q8NC44 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETREG2Q8NC44 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETREG2Q8NC44 MIR935-201ENST00000401179 91 ntBASIC26.55■■□□□ 1.84
RETREG2Q8NC44 AC137630.3-201ENST00000607245 391 ntBASIC26.55■■□□□ 1.84
RETREG2Q8NC44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETREG2Q8NC44 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RETREG2Q8NC44 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 TSPY9P-201ENST00000440215 945 ntBASIC26.54■■□□□ 1.84
RETREG2Q8NC44 TSPY11P-201ENST00000442607 1045 ntBASIC26.54■■□□□ 1.84
RETREG2Q8NC44 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
RETREG2Q8NC44 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.53■■□□□ 1.84
RETREG2Q8NC44 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RETREG2Q8NC44 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RETREG2Q8NC44 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETREG2Q8NC44 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 AC120024.1-201ENST00000562672 995 ntBASIC26.51■■□□□ 1.83
RETREG2Q8NC44 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RETREG2Q8NC44 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RETREG2Q8NC44 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
RETREG2Q8NC44 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.5■■□□□ 1.83
RETREG2Q8NC44 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RETREG2Q8NC44 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RETREG2Q8NC44 ERN1-208ENST00000606895 2068 ntBASIC26.5■■□□□ 1.83
RETREG2Q8NC44 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RETREG2Q8NC44 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RETREG2Q8NC44 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.49■■□□□ 1.83
RETREG2Q8NC44 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RETREG2Q8NC44 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RETREG2Q8NC44 AC021242.3-201ENST00000607598 1377 ntBASIC26.48■■□□□ 1.83
RETREG2Q8NC44 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RETREG2Q8NC44 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
RETREG2Q8NC44 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RETREG2Q8NC44 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.46■■□□□ 1.83
RETREG2Q8NC44 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.46■■□□□ 1.83
RETREG2Q8NC44 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RETREG2Q8NC44 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.46■■□□□ 1.83
RETREG2Q8NC44 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RETREG2Q8NC44 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RETREG2Q8NC44 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.45■■□□□ 1.82
RETREG2Q8NC44 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms