Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 DUX4L11-201ENST00000611504 1267 ntBASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 DUX4L12-201ENST00000614593 1267 ntBASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 DUX4L14-201ENST00000621227 1267 ntBASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC71LQ8N9Z2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 MIR6089-201ENST00000616698 64 ntBASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC71LQ8N9Z2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 PKD1P6-201ENST00000343738 4769 ntBASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC71LQ8N9Z2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC71LQ8N9Z2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 AC004812.2-201ENST00000611079 2094 ntBASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC71LQ8N9Z2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC71LQ8N9Z2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 AC079834.2-201ENST00000609776 1949 ntBASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC71LQ8N9Z2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC71LQ8N9Z2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC71LQ8N9Z2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC71LQ8N9Z2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71LQ8N9Z2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC71LQ8N9Z2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms