Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01561Q8N1V8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
LINC01561Q8N1V8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 AC060814.1-201ENST00000554326 538 ntBASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01561Q8N1V8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01561Q8N1V8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 RP9P-202ENST00000450133 1212 ntBASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC01561Q8N1V8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 ECEL1P2-201ENST00000461596 1295 ntBASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 AC092296.2-201ENST00000589470 999 ntBASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.67■□□□□ 0.1
LINC01561Q8N1V8 AC004812.2-201ENST00000611079 2094 ntBASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LINC01561Q8N1V8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 AC068473.5-201ENST00000616428 2072 ntBASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC01561Q8N1V8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 ABHD17AP4-201ENST00000411545 909 ntBASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 AC016575.1-201ENST00000607026 382 ntBASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01561Q8N1V8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms