Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMIM11AP58511 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.56■■□□□ 1.04
SMIM11AP58511 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.56■■□□□ 1.04
SMIM11AP58511 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.56■■□□□ 1.04
SMIM11AP58511 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMIM11AP58511 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMIM11AP58511 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMIM11AP58511 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 KRT18P10-201ENST00000388836 1287 ntBASIC21.55■■□□□ 1.04
SMIM11AP58511 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.55■■□□□ 1.04
SMIM11AP58511 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 AC092296.2-201ENST00000589470 999 ntBASIC21.55■■□□□ 1.04
SMIM11AP58511 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMIM11AP58511 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.55■■□□□ 1.04
SMIM11AP58511 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
SMIM11AP58511 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMIM11AP58511 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SMIM11AP58511 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM11AP58511 ECEL1P2-201ENST00000461596 1295 ntBASIC21.54■■□□□ 1.04
SMIM11AP58511 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMIM11AP58511 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMIM11AP58511 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMIM11AP58511 RP9P-202ENST00000450133 1212 ntBASIC21.53■■□□□ 1.04
SMIM11AP58511 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.53■■□□□ 1.04
SMIM11AP58511 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SMIM11AP58511 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.53■■□□□ 1.04
SMIM11AP58511 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMIM11AP58511 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMIM11AP58511 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMIM11AP58511 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMIM11AP58511 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMIM11AP58511 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMIM11AP58511 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.51■■□□□ 1.03
SMIM11AP58511 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.51■■□□□ 1.03
SMIM11AP58511 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.51■■□□□ 1.03
SMIM11AP58511 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.51■■□□□ 1.03
SMIM11AP58511 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SMIM11AP58511 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
SMIM11AP58511 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.51■■□□□ 1.03
SMIM11AP58511 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM11AP58511 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM11AP58511 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM11AP58511 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SMIM11AP58511 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMIM11AP58511 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.5■■□□□ 1.03
SMIM11AP58511 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM11AP58511 AC004812.2-201ENST00000611079 2094 ntBASIC21.49■■□□□ 1.03
SMIM11AP58511 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.49■■□□□ 1.03
SMIM11AP58511 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
SMIM11AP58511 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM11AP58511 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.49■■□□□ 1.03
SMIM11AP58511 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.48■■□□□ 1.03
SMIM11AP58511 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM11AP58511 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM11AP58511 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SMIM11AP58511 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM11AP58511 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.48■■□□□ 1.03
SMIM11AP58511 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM11AP58511 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SMIM11AP58511 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM11AP58511 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SMIM11AP58511 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM11AP58511 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SMIM11AP58511 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.47■■□□□ 1.03
SMIM11AP58511 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM11AP58511 AC093536.1-201ENST00000569153 554 ntBASIC21.47■■□□□ 1.03
SMIM11AP58511 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM11AP58511 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM11AP58511 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SMIM11AP58511 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
SMIM11AP58511 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM11AP58511 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM11AP58511 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMIM11AP58511 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.46■■□□□ 1.03
SMIM11AP58511 DUSP8P5-201ENST00000422884 1815 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms