Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AP003733.4-201ENST00000623785 1697 ntBASIC21.78■■□□□ 1.08
PSMD4P55036 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD4P55036 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD4P55036 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD4P55036 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PSMD4P55036 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD4P55036 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PSMD4P55036 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD4P55036 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD4P55036 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD4P55036 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PSMD4P55036 AL592295.1-201ENST00000400984 884 ntBASIC21.77■■□□□ 1.08
PSMD4P55036 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.77■■□□□ 1.08
PSMD4P55036 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PSMD4P55036 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.77■■□□□ 1.08
PSMD4P55036 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PSMD4P55036 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.76■■□□□ 1.07
PSMD4P55036 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD4P55036 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PSMD4P55036 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.76■■□□□ 1.07
PSMD4P55036 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.76■■□□□ 1.07
PSMD4P55036 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PSMD4P55036 AC138932.3-201ENST00000567634 1902 ntBASIC21.76■■□□□ 1.07
PSMD4P55036 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.76■■□□□ 1.07
PSMD4P55036 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD4P55036 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
PSMD4P55036 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD4P55036 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD4P55036 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD4P55036 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.75■■□□□ 1.07
PSMD4P55036 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.75■■□□□ 1.07
PSMD4P55036 AL033527.3-201ENST00000566366 1196 ntBASIC21.75■■□□□ 1.07
PSMD4P55036 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.75■■□□□ 1.07
PSMD4P55036 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PSMD4P55036 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD4P55036 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PSMD4P55036 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
PSMD4P55036 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.74■■□□□ 1.07
PSMD4P55036 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PSMD4P55036 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.73■■□□□ 1.07
PSMD4P55036 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PSMD4P55036 AC022616.5-201ENST00000518796 181 ntBASIC21.73■■□□□ 1.07
PSMD4P55036 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.73■■□□□ 1.07
PSMD4P55036 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PSMD4P55036 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 MIR6089-201ENST00000616698 64 ntBASIC21.72■■□□□ 1.07
PSMD4P55036 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PSMD4P55036 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.72■■□□□ 1.07
PSMD4P55036 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
PSMD4P55036 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PSMD4P55036 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
PSMD4P55036 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
PSMD4P55036 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.71■■□□□ 1.07
PSMD4P55036 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PSMD4P55036 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
PSMD4P55036 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.71■■□□□ 1.07
PSMD4P55036 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PSMD4P55036 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PSMD4P55036 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.7■■□□□ 1.06
PSMD4P55036 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PSMD4P55036 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.7■■□□□ 1.06
PSMD4P55036 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.7■■□□□ 1.06
PSMD4P55036 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PSMD4P55036 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PSMD4P55036 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PSMD4P55036 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PSMD4P55036 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.7■■□□□ 1.06
PSMD4P55036 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PSMD4P55036 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PSMD4P55036 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PSMD4P55036 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.69■■□□□ 1.06
PSMD4P55036 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PSMD4P55036 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PSMD4P55036 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PSMD4P55036 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
PSMD4P55036 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PSMD4P55036 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.68■■□□□ 1.06
PSMD4P55036 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.68■■□□□ 1.06
PSMD4P55036 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PSMD4P55036 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.68■■□□□ 1.06
PSMD4P55036 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PSMD4P55036 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PSMD4P55036 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PSMD4P55036 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PSMD4P55036 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.67■■□□□ 1.06
PSMD4P55036 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PSMD4P55036 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PSMD4P55036 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PSMD4P55036 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.66■■□□□ 1.06
PSMD4P55036 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms