Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MECP2P51608 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MECP2P51608 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
MECP2P51608 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MECP2P51608 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MECP2P51608 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MECP2P51608 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MECP2P51608 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 C9orf163-202ENST00000624034 2573 ntBASIC19.91■□□□□ 0.78
MECP2P51608 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.91■□□□□ 0.78
MECP2P51608 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MECP2P51608 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MECP2P51608 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MECP2P51608 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MECP2P51608 ABHD17AP4-201ENST00000411545 909 ntBASIC19.9■□□□□ 0.78
MECP2P51608 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MECP2P51608 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MECP2P51608 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MECP2P51608 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MECP2P51608 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
MECP2P51608 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MECP2P51608 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MECP2P51608 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MECP2P51608 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MECP2P51608 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.88■□□□□ 0.77
MECP2P51608 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
MECP2P51608 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.88■□□□□ 0.77
MECP2P51608 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MECP2P51608 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
MECP2P51608 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 ABCB10P4-201ENST00000566803 2184 ntBASIC19.87■□□□□ 0.77
MECP2P51608 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.87■□□□□ 0.77
MECP2P51608 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.87■□□□□ 0.77
MECP2P51608 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
MECP2P51608 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MECP2P51608 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MECP2P51608 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MECP2P51608 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MECP2P51608 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MECP2P51608 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MECP2P51608 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MECP2P51608 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MECP2P51608 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.85■□□□□ 0.77
MECP2P51608 DUX4L29-201ENST00000425409 679 ntBASIC19.85■□□□□ 0.77
MECP2P51608 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.85■□□□□ 0.77
MECP2P51608 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.85■□□□□ 0.77
MECP2P51608 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.85■□□□□ 0.77
MECP2P51608 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.85■□□□□ 0.77
MECP2P51608 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.85■□□□□ 0.77
MECP2P51608 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MECP2P51608 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MECP2P51608 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.84■□□□□ 0.77
MECP2P51608 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.84■□□□□ 0.77
MECP2P51608 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.84■□□□□ 0.77
MECP2P51608 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MECP2P51608 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.84■□□□□ 0.77
MECP2P51608 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MECP2P51608 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.83■□□□□ 0.77
MECP2P51608 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MECP2P51608 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MECP2P51608 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.83■□□□□ 0.77
MECP2P51608 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MECP2P51608 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MECP2P51608 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.83■□□□□ 0.77
MECP2P51608 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.83■□□□□ 0.77
MECP2P51608 AC021231.2-201ENST00000594613 730 ntBASIC19.83■□□□□ 0.77
MECP2P51608 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
MECP2P51608 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MECP2P51608 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MECP2P51608 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MECP2P51608 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
MECP2P51608 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.83■□□□□ 0.76
MECP2P51608 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.82■□□□□ 0.76
MECP2P51608 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
MECP2P51608 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MECP2P51608 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MECP2P51608 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MECP2P51608 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.82■□□□□ 0.76
MECP2P51608 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
MECP2P51608 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MECP2P51608 LINC00565-201ENST00000562710 2331 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms