Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SLC6A12P48065 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SLC6A12P48065 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
SLC6A12P48065 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.74■■□□□ 1.23
SLC6A12P48065 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.74■■□□□ 1.23
SLC6A12P48065 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.74■■□□□ 1.23
SLC6A12P48065 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.74■■□□□ 1.23
SLC6A12P48065 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SLC6A12P48065 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SLC6A12P48065 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
SLC6A12P48065 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 LINC01124-201ENST00000409786 2117 ntBASIC22.73■■□□□ 1.23
SLC6A12P48065 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SLC6A12P48065 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SLC6A12P48065 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.72■■□□□ 1.23
SLC6A12P48065 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.72■■□□□ 1.23
SLC6A12P48065 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SLC6A12P48065 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.72■■□□□ 1.23
SLC6A12P48065 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC6A12P48065 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC6A12P48065 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC6A12P48065 DUX4L18-201ENST00000553347 1267 ntBASIC22.71■■□□□ 1.23
SLC6A12P48065 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC6A12P48065 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.71■■□□□ 1.23
SLC6A12P48065 AL592295.1-201ENST00000400984 884 ntBASIC22.7■■□□□ 1.22
SLC6A12P48065 AC004987.1-201ENST00000428627 508 ntBASIC22.7■■□□□ 1.22
SLC6A12P48065 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SLC6A12P48065 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.7■■□□□ 1.22
SLC6A12P48065 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.7■■□□□ 1.22
SLC6A12P48065 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC6A12P48065 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC6A12P48065 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SLC6A12P48065 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
SLC6A12P48065 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC6A12P48065 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC6A12P48065 ATP5G2P3-201ENST00000429083 425 ntBASIC22.69■■□□□ 1.22
SLC6A12P48065 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC6A12P48065 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC6A12P48065 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.69■■□□□ 1.22
SLC6A12P48065 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC6A12P48065 LINC00543-201ENST00000567234 1845 ntBASIC22.68■■□□□ 1.22
SLC6A12P48065 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC6A12P48065 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SLC6A12P48065 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC6A12P48065 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.68■■□□□ 1.22
SLC6A12P48065 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.68■■□□□ 1.22
SLC6A12P48065 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SLC6A12P48065 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC6A12P48065 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC6A12P48065 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC6A12P48065 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.67■■□□□ 1.22
SLC6A12P48065 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC6A12P48065 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SLC6A12P48065 HLA-L-211ENST00000482052 1765 ntBASIC22.67■■□□□ 1.22
SLC6A12P48065 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC6A12P48065 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC6A12P48065 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A12P48065 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.66■■□□□ 1.22
SLC6A12P48065 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A12P48065 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A12P48065 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SLC6A12P48065 AC019171.1-201ENST00000601251 1056 ntBASIC22.66■■□□□ 1.22
SLC6A12P48065 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SLC6A12P48065 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SLC6A12P48065 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A12P48065 AC141586.4-201ENST00000624558 1573 ntBASIC22.66■■□□□ 1.22
SLC6A12P48065 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SLC6A12P48065 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC6A12P48065 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A12P48065 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A12P48065 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A12P48065 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A12P48065 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SLC6A12P48065 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.65■■□□□ 1.22
SLC6A12P48065 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A12P48065 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.65■■□□□ 1.22
SLC6A12P48065 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A12P48065 AC090877.2-201ENST00000558441 1738 ntBASIC22.65■■□□□ 1.22
SLC6A12P48065 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
SLC6A12P48065 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.64■■□□□ 1.22
SLC6A12P48065 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SLC6A12P48065 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms