Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSDP07339 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CTSDP07339 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTSDP07339 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSDP07339 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSDP07339 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSDP07339 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSDP07339 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSDP07339 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSDP07339 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSDP07339 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSDP07339 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTSDP07339 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTSDP07339 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSDP07339 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSDP07339 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSDP07339 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTSDP07339 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSDP07339 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSDP07339 DUX4L11-201ENST00000611504 1267 ntBASIC19.42■□□□□ 0.7
CTSDP07339 DUX4L12-201ENST00000614593 1267 ntBASIC19.42■□□□□ 0.7
CTSDP07339 DUX4L14-201ENST00000621227 1267 ntBASIC19.42■□□□□ 0.7
CTSDP07339 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSDP07339 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSDP07339 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSDP07339 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSDP07339 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSDP07339 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTSDP07339 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSDP07339 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSDP07339 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSDP07339 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSDP07339 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.41■□□□□ 0.7
CTSDP07339 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSDP07339 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSDP07339 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSDP07339 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSDP07339 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSDP07339 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTSDP07339 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CTSDP07339 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSDP07339 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSDP07339 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTSDP07339 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSDP07339 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
CTSDP07339 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSDP07339 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSDP07339 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.39■□□□□ 0.69
CTSDP07339 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSDP07339 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSDP07339 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSDP07339 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTSDP07339 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTSDP07339 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTSDP07339 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.38■□□□□ 0.69
CTSDP07339 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSDP07339 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSDP07339 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.38■□□□□ 0.69
CTSDP07339 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.37■□□□□ 0.69
CTSDP07339 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.37■□□□□ 0.69
CTSDP07339 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.37■□□□□ 0.69
CTSDP07339 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CTSDP07339 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSDP07339 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 HLA-L-211ENST00000482052 1765 ntBASIC19.36■□□□□ 0.69
CTSDP07339 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTSDP07339 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSDP07339 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CTSDP07339 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTSDP07339 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSDP07339 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CTSDP07339 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSDP07339 ABHD17AP4-201ENST00000411545 909 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms