Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
IFNA1P01562 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.55■□□□□ 0.56
IFNA1P01562 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
IFNA1P01562 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
IFNA1P01562 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFNA1P01562 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.54■□□□□ 0.56
IFNA1P01562 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IFNA1P01562 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.54■□□□□ 0.56
IFNA1P01562 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFNA1P01562 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
IFNA1P01562 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.53■□□□□ 0.56
IFNA1P01562 AL391121.1-201ENST00000607967 1349 ntBASIC18.53■□□□□ 0.56
IFNA1P01562 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFNA1P01562 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFNA1P01562 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFNA1P01562 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IFNA1P01562 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.52■□□□□ 0.56
IFNA1P01562 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.52■□□□□ 0.56
IFNA1P01562 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
IFNA1P01562 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.52■□□□□ 0.56
IFNA1P01562 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IFNA1P01562 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IFNA1P01562 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IFNA1P01562 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IFNA1P01562 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
IFNA1P01562 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IFNA1P01562 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IFNA1P01562 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
IFNA1P01562 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 SETD8P1-201ENST00000623146 1180 ntBASIC18.51■□□□□ 0.55
IFNA1P01562 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IFNA1P01562 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 AC110285.7-201ENST00000624417 1536 ntBASIC18.5■□□□□ 0.55
IFNA1P01562 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.5■□□□□ 0.55
IFNA1P01562 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 AC108673.1-201ENST00000510422 1159 ntBASIC18.5■□□□□ 0.55
IFNA1P01562 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFNA1P01562 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IFNA1P01562 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.5■□□□□ 0.55
IFNA1P01562 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IFNA1P01562 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNA1P01562 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNA1P01562 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.49■□□□□ 0.55
IFNA1P01562 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNA1P01562 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNA1P01562 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFNA1P01562 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IFNA1P01562 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.49■□□□□ 0.55
IFNA1P01562 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
IFNA1P01562 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
IFNA1P01562 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.48■□□□□ 0.55
IFNA1P01562 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.48■□□□□ 0.55
IFNA1P01562 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.48■□□□□ 0.55
IFNA1P01562 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IFNA1P01562 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFNA1P01562 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNA1P01562 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNA1P01562 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
IFNA1P01562 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFNA1P01562 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
IFNA1P01562 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 RARRES2P7-201ENST00000567349 469 ntBASIC18.46■□□□□ 0.55
IFNA1P01562 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms