Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
MT-CO1P00395 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.02■■□□□ 1.44
MT-CO1P00395 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
MT-CO1P00395 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
MT-CO1P00395 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
MT-CO1P00395 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MT-CO1P00395 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
MT-CO1P00395 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
MT-CO1P00395 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MT-CO1P00395 THA1P-201ENST00000590384 1145 ntBASIC24.01■■□□□ 1.43
MT-CO1P00395 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
MT-CO1P00395 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24■■□□□ 1.43
MT-CO1P00395 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MT-CO1P00395 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
MT-CO1P00395 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24■■□□□ 1.43
MT-CO1P00395 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MT-CO1P00395 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MT-CO1P00395 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24■■□□□ 1.43
MT-CO1P00395 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
MT-CO1P00395 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MT-CO1P00395 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MT-CO1P00395 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.99■■□□□ 1.43
MT-CO1P00395 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MT-CO1P00395 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MT-CO1P00395 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MT-CO1P00395 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MT-CO1P00395 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.98■■□□□ 1.43
MT-CO1P00395 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
MT-CO1P00395 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.98■■□□□ 1.43
MT-CO1P00395 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.98■■□□□ 1.43
MT-CO1P00395 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MT-CO1P00395 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MT-CO1P00395 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MT-CO1P00395 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
MT-CO1P00395 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.97■■□□□ 1.43
MT-CO1P00395 AC020928.2-201ENST00000588717 2197 ntBASIC23.97■■□□□ 1.43
MT-CO1P00395 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
MT-CO1P00395 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 SLC6A10P-202ENST00000431994 2058 ntBASIC23.96■■□□□ 1.43
MT-CO1P00395 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MT-CO1P00395 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.96■■□□□ 1.43
MT-CO1P00395 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
MT-CO1P00395 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
MT-CO1P00395 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
MT-CO1P00395 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.95■■□□□ 1.43
MT-CO1P00395 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.95■■□□□ 1.42
MT-CO1P00395 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
MT-CO1P00395 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.95■■□□□ 1.42
MT-CO1P00395 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MT-CO1P00395 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MT-CO1P00395 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MT-CO1P00395 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
MT-CO1P00395 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.94■■□□□ 1.42
MT-CO1P00395 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
MT-CO1P00395 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.94■■□□□ 1.42
MT-CO1P00395 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.94■■□□□ 1.42
MT-CO1P00395 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MT-CO1P00395 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MT-CO1P00395 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
MT-CO1P00395 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
MT-CO1P00395 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
MT-CO1P00395 AC239859.2-201ENST00000444165 318 ntBASIC23.93■■□□□ 1.42
MT-CO1P00395 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.92■■□□□ 1.42
MT-CO1P00395 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MT-CO1P00395 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MT-CO1P00395 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.92■■□□□ 1.42
MT-CO1P00395 MIR4281-201ENST00000580852 62 ntBASIC23.92■■□□□ 1.42
MT-CO1P00395 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MT-CO1P00395 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.92■■□□□ 1.42
MT-CO1P00395 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MT-CO1P00395 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.91■■□□□ 1.42
MT-CO1P00395 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.91■■□□□ 1.42
MT-CO1P00395 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.91■■□□□ 1.42
MT-CO1P00395 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.91■■□□□ 1.42
MT-CO1P00395 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.91■■□□□ 1.42
MT-CO1P00395 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MT-CO1P00395 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
MT-CO1P00395 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.91■■□□□ 1.42
MT-CO1P00395 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.9■■□□□ 1.42
MT-CO1P00395 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MT-CO1P00395 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
MT-CO1P00395 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
MT-CO1P00395 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MT-CO1P00395 AC011551.1-201ENST00000614101 683 ntBASIC23.9■■□□□ 1.42
MT-CO1P00395 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MT-CO1P00395 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.9■■□□□ 1.42
MT-CO1P00395 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
MT-CO1P00395 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.89■■□□□ 1.42
MT-CO1P00395 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms