Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-4A0A1B0GX49 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 LINC01124-201ENST00000409786 2117 ntBASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-4A0A1B0GX49 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 AC087393.1-201ENST00000582896 145 ntBASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 LINC00543-201ENST00000567234 1845 ntBASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-4A0A1B0GX49 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV6-4A0A1B0GX49 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-4A0A1B0GX49 DUX4L9-201ENST00000449051 1259 ntBASIC16.52■□□□□ 0.24
TRBV6-4A0A1B0GX49 SPCS2P3-201ENST00000500401 656 ntBASIC16.52■□□□□ 0.24
TRBV6-4A0A1B0GX49 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV6-4A0A1B0GX49 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRBV6-4A0A1B0GX49 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
TRBV6-4A0A1B0GX49 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 U85056.1-201ENST00000616429 682 ntBASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-4A0A1B0GX49 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 ABHD17AP5-201ENST00000580133 923 ntBASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-4A0A1B0GX49 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 AL592295.1-201ENST00000400984 884 ntBASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRBV6-4A0A1B0GX49 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-4A0A1B0GX49 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 AC129492.7-201ENST00000622992 756 ntBASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV6-4A0A1B0GX49 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-4A0A1B0GX49 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-4A0A1B0GX49 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms