Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3DA0A087WVF3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3DA0A087WVF3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.49■■□□□ 1.35
TBC1D3DA0A087WVF3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.49■■□□□ 1.35
TBC1D3DA0A087WVF3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 MTDHP2-201ENST00000601468 714 ntBASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3DA0A087WVF3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 AC092803.2-201ENST00000564287 1899 ntBASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3DA0A087WVF3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 AC090877.2-201ENST00000558441 1738 ntBASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3DA0A087WVF3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TBC1D3DA0A087WVF3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.45■■□□□ 1.34
TBC1D3DA0A087WVF3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3DA0A087WVF3 AF131216.4-201ENST00000638924 1588 ntBASIC23.44■■□□□ 1.34
TBC1D3DA0A087WVF3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3DA0A087WVF3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.44■■□□□ 1.34
TBC1D3DA0A087WVF3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3DA0A087WVF3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3DA0A087WVF3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TBC1D3DA0A087WVF3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 MIR6724-1-201ENST00000616420 92 ntBASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 MIR6724-2-201ENST00000616483 92 ntBASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 MIR6724-4-201ENST00000617390 92 ntBASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 MIR6724-3-201ENST00000622482 92 ntBASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3DA0A087WVF3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TBC1D3DA0A087WVF3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D3DA0A087WVF3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D3DA0A087WVF3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.39■■□□□ 1.34
TBC1D3DA0A087WVF3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TBC1D3DA0A087WVF3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D3DA0A087WVF3 AC019069.1-201ENST00000610008 1333 ntBASIC23.37■■□□□ 1.33
TBC1D3DA0A087WVF3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TBC1D3DA0A087WVF3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms