Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKB-CPT1BH3BT56 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.81■□□□□ 0.28
CHKB-CPT1BH3BT56 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHKB-CPT1BH3BT56 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CHKB-CPT1BH3BT56 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHKB-CPT1BH3BT56 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC16.74■□□□□ 0.27
CHKB-CPT1BH3BT56 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHKB-CPT1BH3BT56 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHKB-CPT1BH3BT56 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHKB-CPT1BH3BT56 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHKB-CPT1BH3BT56 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKB-CPT1BH3BT56 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHKB-CPT1BH3BT56 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHKB-CPT1BH3BT56 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHKB-CPT1BH3BT56 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.62■□□□□ 0.25
CHKB-CPT1BH3BT56 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHKB-CPT1BH3BT56 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHKB-CPT1BH3BT56 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHKB-CPT1BH3BT56 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHKB-CPT1BH3BT56 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHKB-CPT1BH3BT56 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHKB-CPT1BH3BT56 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CHKB-CPT1BH3BT56 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHKB-CPT1BH3BT56 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHKB-CPT1BH3BT56 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHKB-CPT1BH3BT56 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHKB-CPT1BH3BT56 AL161658.1-201ENST00000623641 1967 ntBASIC16.53■□□□□ 0.24
CHKB-CPT1BH3BT56 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.52■□□□□ 0.23
CHKB-CPT1BH3BT56 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CHKB-CPT1BH3BT56 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.51■□□□□ 0.23
CHKB-CPT1BH3BT56 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHKB-CPT1BH3BT56 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHKB-CPT1BH3BT56 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHKB-CPT1BH3BT56 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKB-CPT1BH3BT56 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKB-CPT1BH3BT56 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKB-CPT1BH3BT56 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHKB-CPT1BH3BT56 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHKB-CPT1BH3BT56 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
CHKB-CPT1BH3BT56 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKB-CPT1BH3BT56 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKB-CPT1BH3BT56 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKB-CPT1BH3BT56 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKB-CPT1BH3BT56 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKB-CPT1BH3BT56 ST7-202ENST00000323984 2142 ntTSL 5 BASIC16.43■□□□□ 0.22
CHKB-CPT1BH3BT56 ST7-207ENST00000393449 2127 ntTSL 5 BASIC16.43■□□□□ 0.22
CHKB-CPT1BH3BT56 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHKB-CPT1BH3BT56 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.42■□□□□ 0.22
CHKB-CPT1BH3BT56 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHKB-CPT1BH3BT56 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKB-CPT1BH3BT56 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.39■□□□□ 0.21
CHKB-CPT1BH3BT56 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKB-CPT1BH3BT56 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CHKB-CPT1BH3BT56 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHKB-CPT1BH3BT56 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHKB-CPT1BH3BT56 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHKB-CPT1BH3BT56 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHKB-CPT1BH3BT56 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHKB-CPT1BH3BT56 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHKB-CPT1BH3BT56 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHKB-CPT1BH3BT56 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHKB-CPT1BH3BT56 AC139426.1-201ENST00000568218 2529 ntBASIC16.32■□□□□ 0.2
CHKB-CPT1BH3BT56 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKB-CPT1BH3BT56 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHKB-CPT1BH3BT56 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CHKB-CPT1BH3BT56 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKB-CPT1BH3BT56 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKB-CPT1BH3BT56 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKB-CPT1BH3BT56 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKB-CPT1BH3BT56 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKB-CPT1BH3BT56 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHKB-CPT1BH3BT56 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKB-CPT1BH3BT56 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHKB-CPT1BH3BT56 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKB-CPT1BH3BT56 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKB-CPT1BH3BT56 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHKB-CPT1BH3BT56 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKB-CPT1BH3BT56 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHKB-CPT1BH3BT56 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHKB-CPT1BH3BT56 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CHKB-CPT1BH3BT56 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKB-CPT1BH3BT56 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKB-CPT1BH3BT56 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKB-CPT1BH3BT56 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKB-CPT1BH3BT56 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKB-CPT1BH3BT56 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKB-CPT1BH3BT56 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHKB-CPT1BH3BT56 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHKB-CPT1BH3BT56 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHKB-CPT1BH3BT56 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHKB-CPT1BH3BT56 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHKB-CPT1BH3BT56 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKB-CPT1BH3BT56 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHKB-CPT1BH3BT56 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHKB-CPT1BH3BT56 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKB-CPT1BH3BT56 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKB-CPT1BH3BT56 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKB-CPT1BH3BT56 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC16.08■□□□□ 0.17
CHKB-CPT1BH3BT56 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHKB-CPT1BH3BT56 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms