Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 MIR6089-201ENST00000616698 64 ntBASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 AC079834.2-201ENST00000609776 1949 ntBASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 AC126177.7-201ENST00000547904 679 ntBASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L11-201ENST00000611504 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L12-201ENST00000614593 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L14-201ENST00000621227 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TMEM56-RWDD3S4R434 ABCB10P4-201ENST00000566803 2184 ntBASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms