Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHA13Q9Y5I0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA13Q9Y5I0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA13Q9Y5I0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA13Q9Y5I0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 MIR3960-201ENST00000583311 91 ntBASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA13Q9Y5I0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 AC060814.1-201ENST00000554326 538 ntBASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA13Q9Y5I0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHA13Q9Y5I0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PCDHA13Q9Y5I0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDHA13Q9Y5I0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA13Q9Y5I0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHA13Q9Y5I0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHA13Q9Y5I0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 SMPD5-203ENST00000639008 1464 ntBASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA13Q9Y5I0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA13Q9Y5I0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 AC133561.1-201ENST00000568600 2415 ntBASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 AC004812.2-201ENST00000611079 2094 ntBASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA13Q9Y5I0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 MIR6089-201ENST00000616698 64 ntBASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA13Q9Y5I0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHA13Q9Y5I0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA13Q9Y5I0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHA13Q9Y5I0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA13Q9Y5I0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA13Q9Y5I0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA13Q9Y5I0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA13Q9Y5I0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA13Q9Y5I0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA13Q9Y5I0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA13Q9Y5I0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA13Q9Y5I0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 AC092296.2-201ENST00000589470 999 ntBASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA13Q9Y5I0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms