Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 AC026271.2-201ENST00000428091 497 ntBASIC25.23■■□□□ 1.63
NSUN3Q9H649 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.23■■□□□ 1.63
NSUN3Q9H649 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.23■■□□□ 1.63
NSUN3Q9H649 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
NSUN3Q9H649 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NSUN3Q9H649 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 DRD5P2-201ENST00000421395 2012 ntBASIC25.22■■□□□ 1.63
NSUN3Q9H649 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
NSUN3Q9H649 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NSUN3Q9H649 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.21■■□□□ 1.63
NSUN3Q9H649 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NSUN3Q9H649 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.21■■□□□ 1.63
NSUN3Q9H649 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NSUN3Q9H649 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
NSUN3Q9H649 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
NSUN3Q9H649 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NSUN3Q9H649 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
NSUN3Q9H649 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
NSUN3Q9H649 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NSUN3Q9H649 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.2■■□□□ 1.62
NSUN3Q9H649 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NSUN3Q9H649 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NSUN3Q9H649 AC104564.3-201ENST00000582367 638 ntBASIC25.2■■□□□ 1.62
NSUN3Q9H649 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.2■■□□□ 1.62
NSUN3Q9H649 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NSUN3Q9H649 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NSUN3Q9H649 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.19■■□□□ 1.62
NSUN3Q9H649 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NSUN3Q9H649 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.19■■□□□ 1.62
NSUN3Q9H649 AC135279.3-201ENST00000610945 1311 ntBASIC25.18■■□□□ 1.62
NSUN3Q9H649 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
NSUN3Q9H649 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.18■■□□□ 1.62
NSUN3Q9H649 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.18■■□□□ 1.62
NSUN3Q9H649 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
NSUN3Q9H649 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.18■■□□□ 1.62
NSUN3Q9H649 MIR5787-201ENST00000611784 55 ntBASIC25.18■■□□□ 1.62
NSUN3Q9H649 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.18■■□□□ 1.62
NSUN3Q9H649 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
NSUN3Q9H649 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NSUN3Q9H649 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NSUN3Q9H649 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.17■■□□□ 1.62
NSUN3Q9H649 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.17■■□□□ 1.62
NSUN3Q9H649 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NSUN3Q9H649 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NSUN3Q9H649 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NSUN3Q9H649 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NSUN3Q9H649 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.17■■□□□ 1.62
NSUN3Q9H649 AC142086.6-201ENST00000621154 1765 ntBASIC25.16■■□□□ 1.62
NSUN3Q9H649 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NSUN3Q9H649 UNC93B3-201ENST00000308076 687 ntBASIC25.15■■□□□ 1.62
NSUN3Q9H649 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.15■■□□□ 1.62
NSUN3Q9H649 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.15■■□□□ 1.62
NSUN3Q9H649 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.15■■□□□ 1.62
NSUN3Q9H649 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.15■■□□□ 1.62
NSUN3Q9H649 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NSUN3Q9H649 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NSUN3Q9H649 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
NSUN3Q9H649 SUDS3P1-201ENST00000505831 966 ntBASIC25.14■■□□□ 1.62
NSUN3Q9H649 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.14■■□□□ 1.62
NSUN3Q9H649 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.14■■□□□ 1.62
NSUN3Q9H649 AL031432.3-201ENST00000607698 485 ntBASIC25.14■■□□□ 1.62
NSUN3Q9H649 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.14■■□□□ 1.62
NSUN3Q9H649 AC142472.1-201ENST00000612013 1741 ntBASIC25.14■■□□□ 1.61
NSUN3Q9H649 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NSUN3Q9H649 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
NSUN3Q9H649 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
NSUN3Q9H649 AL136162.1-201ENST00000607711 1078 ntBASIC25.13■■□□□ 1.61
NSUN3Q9H649 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.13■■□□□ 1.61
NSUN3Q9H649 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
NSUN3Q9H649 AF131216.4-201ENST00000638924 1588 ntBASIC25.13■■□□□ 1.61
NSUN3Q9H649 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NSUN3Q9H649 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.12■■□□□ 1.61
NSUN3Q9H649 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NSUN3Q9H649 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.12■■□□□ 1.61
NSUN3Q9H649 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.12■■□□□ 1.61
NSUN3Q9H649 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NSUN3Q9H649 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NSUN3Q9H649 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
NSUN3Q9H649 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NSUN3Q9H649 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NSUN3Q9H649 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NSUN3Q9H649 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NSUN3Q9H649 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
NSUN3Q9H649 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NSUN3Q9H649 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
NSUN3Q9H649 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NSUN3Q9H649 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.1■■□□□ 1.61
NSUN3Q9H649 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NSUN3Q9H649 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
NSUN3Q9H649 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.09■■□□□ 1.61
NSUN3Q9H649 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NSUN3Q9H649 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.09■■□□□ 1.61
NSUN3Q9H649 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.09■■□□□ 1.61
NSUN3Q9H649 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NSUN3Q9H649 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
NSUN3Q9H649 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms