Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
POLR2J3Q9H1A7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 AC022413.1-201ENST00000624602 984 ntBASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.72■■□□□ 1.07
POLR2J3Q9H1A7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR2J3Q9H1A7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR2J3Q9H1A7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
POLR2J3Q9H1A7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
POLR2J3Q9H1A7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POLR2J3Q9H1A7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
POLR2J3Q9H1A7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 KRT18P10-201ENST00000388836 1287 ntBASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POLR2J3Q9H1A7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POLR2J3Q9H1A7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2J3Q9H1A7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 AC141586.4-201ENST00000624558 1573 ntBASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 AC093536.1-201ENST00000569153 554 ntBASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 AC007029.1-201ENST00000604183 313 ntBASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 MIR6089-201ENST00000616698 64 ntBASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2J3Q9H1A7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POLR2J3Q9H1A7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 LINC00543-201ENST00000567234 1845 ntBASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2J3Q9H1A7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
POLR2J3Q9H1A7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
POLR2J3Q9H1A7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2J3Q9H1A7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.64■■□□□ 1.05
POLR2J3Q9H1A7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2J3Q9H1A7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.64■■□□□ 1.05
POLR2J3Q9H1A7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2J3Q9H1A7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2J3Q9H1A7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms