Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LINC00116Q8NCU8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.46■■■□□ 2.47
LINC00116Q8NCU8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LINC00116Q8NCU8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.45■■■□□ 2.47
LINC00116Q8NCU8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
LINC00116Q8NCU8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
LINC00116Q8NCU8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LINC00116Q8NCU8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.44■■■□□ 2.46
LINC00116Q8NCU8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LINC00116Q8NCU8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 RARRES2P6-201ENST00000567333 442 ntBASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 AC106739.1-201ENST00000617035 715 ntBASIC30.43■■■□□ 2.46
LINC00116Q8NCU8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
LINC00116Q8NCU8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
LINC00116Q8NCU8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.41■■■□□ 2.46
LINC00116Q8NCU8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 PBX2P1-201ENST00000493219 1291 ntBASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LINC00116Q8NCU8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.39■■■□□ 2.46
LINC00116Q8NCU8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
LINC00116Q8NCU8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 AL031432.3-201ENST00000607698 485 ntBASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
LINC00116Q8NCU8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 AC092666.2-201ENST00000613287 246 ntBASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
LINC00116Q8NCU8 AC026271.2-201ENST00000428091 497 ntBASIC30.36■■■□□ 2.45
LINC00116Q8NCU8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.35■■■□□ 2.45
LINC00116Q8NCU8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.34■■■□□ 2.45
LINC00116Q8NCU8 AC142381.2-201ENST00000566120 298 ntBASIC30.34■■■□□ 2.45
LINC00116Q8NCU8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LINC00116Q8NCU8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LINC00116Q8NCU8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.33■■■□□ 2.45
LINC00116Q8NCU8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LINC00116Q8NCU8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LINC00116Q8NCU8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LINC00116Q8NCU8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LINC00116Q8NCU8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LINC00116Q8NCU8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
LINC00116Q8NCU8 UNC93B3-201ENST00000308076 687 ntBASIC30.31■■■□□ 2.44
LINC00116Q8NCU8 SUDS3P1-201ENST00000505831 966 ntBASIC30.31■■■□□ 2.44
LINC00116Q8NCU8 SNX5-217ENST00000606557 1087 ntBASIC30.31■■■□□ 2.44
LINC00116Q8NCU8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LINC00116Q8NCU8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LINC00116Q8NCU8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
LINC00116Q8NCU8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
LINC00116Q8NCU8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LINC00116Q8NCU8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LINC00116Q8NCU8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LINC00116Q8NCU8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
LINC00116Q8NCU8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.27■■■□□ 2.44
LINC00116Q8NCU8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms