Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI1Q7Z5J4 AC092028.1-203ENST00000608262 953 ntBASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAI1Q7Z5J4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RAI1Q7Z5J4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 MIR638-201ENST00000385237 100 ntBASIC20.35■□□□□ 0.85
RAI1Q7Z5J4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAI1Q7Z5J4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
RAI1Q7Z5J4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAI1Q7Z5J4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
RAI1Q7Z5J4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.33■□□□□ 0.84
RAI1Q7Z5J4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.33■□□□□ 0.84
RAI1Q7Z5J4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 AL117332.1-201ENST00000622628 974 ntBASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAI1Q7Z5J4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAI1Q7Z5J4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 TSPY9P-201ENST00000440215 945 ntBASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 TSPY11P-201ENST00000442607 1045 ntBASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 ERN1-208ENST00000606895 2068 ntBASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RAI1Q7Z5J4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MIR6724-1-201ENST00000616420 92 ntBASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MIR6724-2-201ENST00000616483 92 ntBASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MIR6724-4-201ENST00000617390 92 ntBASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 MIR6724-3-201ENST00000622482 92 ntBASIC20.29■□□□□ 0.84
RAI1Q7Z5J4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 AL512631.2-201ENST00000604634 923 ntBASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 AC092803.2-201ENST00000564287 1899 ntBASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAI1Q7Z5J4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 AC110285.6-201ENST00000617652 491 ntBASIC20.27■□□□□ 0.84
RAI1Q7Z5J4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.26■□□□□ 0.83
RAI1Q7Z5J4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAI1Q7Z5J4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
RAI1Q7Z5J4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms