Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MTDHP2-201ENST00000601468 714 ntBASIC30.35■■■□□ 2.45
COL15A1P39059 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
COL15A1P39059 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
COL15A1P39059 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL15A1P39059 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
COL15A1P39059 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
COL15A1P39059 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL15A1P39059 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.34■■■□□ 2.45
COL15A1P39059 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL15A1P39059 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
COL15A1P39059 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
COL15A1P39059 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.33■■■□□ 2.45
COL15A1P39059 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.33■■■□□ 2.45
COL15A1P39059 MIR3621-201ENST00000580529 85 ntBASIC30.33■■■□□ 2.45
COL15A1P39059 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL15A1P39059 MIR6724-1-201ENST00000616420 92 ntBASIC30.33■■■□□ 2.45
COL15A1P39059 MIR6724-2-201ENST00000616483 92 ntBASIC30.33■■■□□ 2.45
COL15A1P39059 MIR6724-4-201ENST00000617390 92 ntBASIC30.33■■■□□ 2.45
COL15A1P39059 MIR6724-3-201ENST00000622482 92 ntBASIC30.33■■■□□ 2.45
COL15A1P39059 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.33■■■□□ 2.45
COL15A1P39059 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
COL15A1P39059 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL15A1P39059 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.33■■■□□ 2.45
COL15A1P39059 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.32■■■□□ 2.44
COL15A1P39059 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
COL15A1P39059 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.32■■■□□ 2.44
COL15A1P39059 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.32■■■□□ 2.44
COL15A1P39059 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL15A1P39059 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.32■■■□□ 2.44
COL15A1P39059 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL15A1P39059 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
COL15A1P39059 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.31■■■□□ 2.44
COL15A1P39059 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.3■■■□□ 2.44
COL15A1P39059 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL15A1P39059 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
COL15A1P39059 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL15A1P39059 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.29■■■□□ 2.44
COL15A1P39059 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
COL15A1P39059 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.29■■■□□ 2.44
COL15A1P39059 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
COL15A1P39059 AC110285.6-201ENST00000617652 491 ntBASIC30.29■■■□□ 2.44
COL15A1P39059 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
COL15A1P39059 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL15A1P39059 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL15A1P39059 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL15A1P39059 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL15A1P39059 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL15A1P39059 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL15A1P39059 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL15A1P39059 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.28■■■□□ 2.44
COL15A1P39059 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL15A1P39059 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
COL15A1P39059 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL15A1P39059 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.27■■■□□ 2.44
COL15A1P39059 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.27■■■□□ 2.44
COL15A1P39059 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.27■■■□□ 2.44
COL15A1P39059 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.27■■■□□ 2.44
COL15A1P39059 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.26■■■□□ 2.43
COL15A1P39059 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
COL15A1P39059 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL15A1P39059 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.25■■■□□ 2.43
COL15A1P39059 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL15A1P39059 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.25■■■□□ 2.43
COL15A1P39059 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
COL15A1P39059 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.25■■■□□ 2.43
COL15A1P39059 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.25■■■□□ 2.43
COL15A1P39059 MIR4466-201ENST00000606121 54 ntBASIC30.25■■■□□ 2.43
COL15A1P39059 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
COL15A1P39059 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL15A1P39059 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.24■■■□□ 2.43
COL15A1P39059 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.24■■■□□ 2.43
COL15A1P39059 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.24■■■□□ 2.43
COL15A1P39059 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL15A1P39059 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL15A1P39059 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL15A1P39059 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL15A1P39059 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.22■■■□□ 2.43
COL15A1P39059 AL512631.2-201ENST00000604634 923 ntBASIC30.22■■■□□ 2.43
COL15A1P39059 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
COL15A1P39059 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL15A1P39059 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL15A1P39059 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.21■■■□□ 2.43
COL15A1P39059 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL15A1P39059 AL121749.1-202ENST00000609313 2153 ntBASIC30.21■■■□□ 2.43
COL15A1P39059 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL15A1P39059 AL356740.2-201ENST00000601559 647 ntBASIC30.2■■■□□ 2.43
COL15A1P39059 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL15A1P39059 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.19■■■□□ 2.42
COL15A1P39059 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.19■■■□□ 2.42
COL15A1P39059 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
COL15A1P39059 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.19■■■□□ 2.42
COL15A1P39059 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.19■■■□□ 2.42
COL15A1P39059 AF131216.4-201ENST00000638924 1588 ntBASIC30.19■■■□□ 2.42
COL15A1P39059 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
COL15A1P39059 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.18■■■□□ 2.42
COL15A1P39059 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.18■■■□□ 2.42
COL15A1P39059 AC096631.2-201ENST00000436136 790 ntBASIC30.18■■■□□ 2.42
COL15A1P39059 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.18■■■□□ 2.42
COL15A1P39059 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.18■■■□□ 2.42
COL15A1P39059 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms