Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.73■■□□□ 1.07
RPS4Y1P22090 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4Y1P22090 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4Y1P22090 SPCS2P3-201ENST00000500401 656 ntBASIC21.72■■□□□ 1.07
RPS4Y1P22090 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4Y1P22090 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.72■■□□□ 1.07
RPS4Y1P22090 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4Y1P22090 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4Y1P22090 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
RPS4Y1P22090 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.71■■□□□ 1.07
RPS4Y1P22090 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.71■■□□□ 1.07
RPS4Y1P22090 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4Y1P22090 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4Y1P22090 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4Y1P22090 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4Y1P22090 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.71■■□□□ 1.07
RPS4Y1P22090 FOXO3B-201ENST00000395675 1928 ntBASIC21.7■■□□□ 1.07
RPS4Y1P22090 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RPS4Y1P22090 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4Y1P22090 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4Y1P22090 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4Y1P22090 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4Y1P22090 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.69■■□□□ 1.06
RPS4Y1P22090 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.69■■□□□ 1.06
RPS4Y1P22090 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4Y1P22090 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPS4Y1P22090 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.68■■□□□ 1.06
RPS4Y1P22090 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPS4Y1P22090 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.68■■□□□ 1.06
RPS4Y1P22090 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4Y1P22090 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4Y1P22090 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.67■■□□□ 1.06
RPS4Y1P22090 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4Y1P22090 RPS2P7-201ENST00000447334 885 ntBASIC21.67■■□□□ 1.06
RPS4Y1P22090 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4Y1P22090 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.67■■□□□ 1.06
RPS4Y1P22090 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.66■■□□□ 1.06
RPS4Y1P22090 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y1P22090 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y1P22090 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y1P22090 U85056.1-201ENST00000616429 682 ntBASIC21.66■■□□□ 1.06
RPS4Y1P22090 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y1P22090 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y1P22090 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RPS4Y1P22090 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y1P22090 LINC01124-201ENST00000409786 2117 ntBASIC21.65■■□□□ 1.06
RPS4Y1P22090 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.65■■□□□ 1.06
RPS4Y1P22090 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y1P22090 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.65■■□□□ 1.06
RPS4Y1P22090 AC018755.3-202ENST00000596210 929 ntBASIC21.65■■□□□ 1.06
RPS4Y1P22090 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y1P22090 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.64■■□□□ 1.06
RPS4Y1P22090 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
RPS4Y1P22090 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPS4Y1P22090 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.64■■□□□ 1.05
RPS4Y1P22090 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.64■■□□□ 1.05
RPS4Y1P22090 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RPS4Y1P22090 DUX4L9-201ENST00000449051 1259 ntBASIC21.64■■□□□ 1.05
RPS4Y1P22090 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RPS4Y1P22090 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPS4Y1P22090 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y1P22090 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RPS4Y1P22090 LINC00543-201ENST00000567234 1845 ntBASIC21.63■■□□□ 1.05
RPS4Y1P22090 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
RPS4Y1P22090 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y1P22090 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.62■■□□□ 1.05
RPS4Y1P22090 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
RPS4Y1P22090 AC087393.1-201ENST00000582896 145 ntBASIC21.62■■□□□ 1.05
RPS4Y1P22090 MIR6765-201ENST00000614092 87 ntBASIC21.62■■□□□ 1.05
RPS4Y1P22090 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4Y1P22090 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4Y1P22090 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4Y1P22090 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4Y1P22090 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y1P22090 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
RPS4Y1P22090 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y1P22090 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.61■■□□□ 1.05
RPS4Y1P22090 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y1P22090 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RPS4Y1P22090 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.6■■□□□ 1.05
RPS4Y1P22090 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.6■■□□□ 1.05
RPS4Y1P22090 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y1P22090 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.6■■□□□ 1.05
RPS4Y1P22090 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms