Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINGO3P0C6S8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LINGO3P0C6S8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.63■■□□□ 1.21
LINGO3P0C6S8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LINGO3P0C6S8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LINGO3P0C6S8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 AP004609.3-201ENST00000610705 1884 ntBASIC22.62■■□□□ 1.21
LINGO3P0C6S8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LINGO3P0C6S8 LINC00565-201ENST00000562710 2331 ntBASIC22.62■■□□□ 1.21
LINGO3P0C6S8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LINGO3P0C6S8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
LINGO3P0C6S8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINGO3P0C6S8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LINGO3P0C6S8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LINGO3P0C6S8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LINGO3P0C6S8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.58■■□□□ 1.21
LINGO3P0C6S8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LINGO3P0C6S8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.58■■□□□ 1.2
LINGO3P0C6S8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 AL117328.2-201ENST00000624617 1940 ntBASIC22.57■■□□□ 1.2
LINGO3P0C6S8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.57■■□□□ 1.2
LINGO3P0C6S8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINGO3P0C6S8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.55■■□□□ 1.2
LINGO3P0C6S8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LINGO3P0C6S8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LINGO3P0C6S8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.55■■□□□ 1.2
LINGO3P0C6S8 AC142472.1-201ENST00000612013 1741 ntBASIC22.54■■□□□ 1.2
LINGO3P0C6S8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LINGO3P0C6S8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms