Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.75■■□□□ 1.23
SNRNP200O75643 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SNRNP200O75643 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
SNRNP200O75643 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SNRNP200O75643 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.75■■□□□ 1.23
SNRNP200O75643 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNRNP200O75643 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.74■■□□□ 1.23
SNRNP200O75643 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SNRNP200O75643 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.74■■□□□ 1.23
SNRNP200O75643 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.74■■□□□ 1.23
SNRNP200O75643 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SNRNP200O75643 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.73■■□□□ 1.23
SNRNP200O75643 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SNRNP200O75643 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.72■■□□□ 1.23
SNRNP200O75643 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SNRNP200O75643 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SNRNP200O75643 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SNRNP200O75643 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SNRNP200O75643 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.71■■□□□ 1.23
SNRNP200O75643 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SNRNP200O75643 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SNRNP200O75643 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
SNRNP200O75643 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SNRNP200O75643 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.71■■□□□ 1.23
SNRNP200O75643 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.71■■□□□ 1.23
SNRNP200O75643 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SNRNP200O75643 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SNRNP200O75643 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SNRNP200O75643 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
SNRNP200O75643 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.7■■□□□ 1.23
SNRNP200O75643 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SNRNP200O75643 AC020928.2-201ENST00000588717 2197 ntBASIC22.7■■□□□ 1.23
SNRNP200O75643 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SNRNP200O75643 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SNRNP200O75643 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SNRNP200O75643 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SNRNP200O75643 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SNRNP200O75643 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP200O75643 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.69■■□□□ 1.22
SNRNP200O75643 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP200O75643 SLC6A10P-202ENST00000431994 2058 ntBASIC22.69■■□□□ 1.22
SNRNP200O75643 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SNRNP200O75643 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP200O75643 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP200O75643 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.68■■□□□ 1.22
SNRNP200O75643 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.68■■□□□ 1.22
SNRNP200O75643 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.68■■□□□ 1.22
SNRNP200O75643 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.68■■□□□ 1.22
SNRNP200O75643 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
SNRNP200O75643 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.68■■□□□ 1.22
SNRNP200O75643 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SNRNP200O75643 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP200O75643 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP200O75643 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP200O75643 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP200O75643 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SNRNP200O75643 LONRF2P2-201ENST00000439212 571 ntBASIC22.67■■□□□ 1.22
SNRNP200O75643 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SNRNP200O75643 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SNRNP200O75643 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.66■■□□□ 1.22
SNRNP200O75643 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP200O75643 FOXO3B-201ENST00000395675 1928 ntBASIC22.66■■□□□ 1.22
SNRNP200O75643 AL035685.1-201ENST00000636663 812 ntBASIC22.66■■□□□ 1.22
SNRNP200O75643 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.66■■□□□ 1.22
SNRNP200O75643 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SNRNP200O75643 YBX1P4-201ENST00000392794 808 ntBASIC22.65■■□□□ 1.22
SNRNP200O75643 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SNRNP200O75643 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SNRNP200O75643 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SNRNP200O75643 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRNP200O75643 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRNP200O75643 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNRNP200O75643 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.64■■□□□ 1.21
SNRNP200O75643 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.64■■□□□ 1.21
SNRNP200O75643 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SNRNP200O75643 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRNP200O75643 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRNP200O75643 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.63■■□□□ 1.21
SNRNP200O75643 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.63■■□□□ 1.21
SNRNP200O75643 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRNP200O75643 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.63■■□□□ 1.21
SNRNP200O75643 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
SNRNP200O75643 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.63■■□□□ 1.21
SNRNP200O75643 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms