Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SPG7Q9UQ90 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SPG7Q9UQ90 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SPG7Q9UQ90 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SPG7Q9UQ90 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SPG7Q9UQ90 AC142086.6-201ENST00000621154 1765 ntBASIC31.4■■■□□ 2.62
SPG7Q9UQ90 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.4■■■□□ 2.62
SPG7Q9UQ90 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SPG7Q9UQ90 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SPG7Q9UQ90 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.39■■■□□ 2.62
SPG7Q9UQ90 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.39■■■□□ 2.62
SPG7Q9UQ90 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
SPG7Q9UQ90 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.39■■■□□ 2.62
SPG7Q9UQ90 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.39■■■□□ 2.61
SPG7Q9UQ90 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.38■■■□□ 2.61
SPG7Q9UQ90 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.38■■■□□ 2.61
SPG7Q9UQ90 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.37■■■□□ 2.61
SPG7Q9UQ90 AC011551.1-201ENST00000614101 683 ntBASIC31.37■■■□□ 2.61
SPG7Q9UQ90 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPG7Q9UQ90 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPG7Q9UQ90 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.36■■■□□ 2.61
SPG7Q9UQ90 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SPG7Q9UQ90 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.34■■■□□ 2.61
SPG7Q9UQ90 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.34■■■□□ 2.61
SPG7Q9UQ90 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.34■■■□□ 2.61
SPG7Q9UQ90 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPG7Q9UQ90 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SPG7Q9UQ90 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
SPG7Q9UQ90 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.33■■■□□ 2.61
SPG7Q9UQ90 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SPG7Q9UQ90 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.32■■■□□ 2.6
SPG7Q9UQ90 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SPG7Q9UQ90 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
SPG7Q9UQ90 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SPG7Q9UQ90 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.31■■■□□ 2.6
SPG7Q9UQ90 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
SPG7Q9UQ90 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
SPG7Q9UQ90 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SPG7Q9UQ90 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SPG7Q9UQ90 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.3■■■□□ 2.6
SPG7Q9UQ90 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.29■■■□□ 2.6
SPG7Q9UQ90 AC010997.5-201ENST00000609182 354 ntBASIC31.29■■■□□ 2.6
SPG7Q9UQ90 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.29■■■□□ 2.6
SPG7Q9UQ90 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPG7Q9UQ90 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.29■■■□□ 2.6
SPG7Q9UQ90 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SPG7Q9UQ90 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SPG7Q9UQ90 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.27■■■□□ 2.6
SPG7Q9UQ90 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.26■■■□□ 2.59
SPG7Q9UQ90 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.26■■■□□ 2.59
SPG7Q9UQ90 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.26■■■□□ 2.59
SPG7Q9UQ90 AC131281.2-201ENST00000520478 145 ntBASIC31.26■■■□□ 2.59
SPG7Q9UQ90 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.25■■■□□ 2.59
SPG7Q9UQ90 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SPG7Q9UQ90 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.24■■■□□ 2.59
SPG7Q9UQ90 MTDHP2-201ENST00000601468 714 ntBASIC31.24■■■□□ 2.59
SPG7Q9UQ90 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPG7Q9UQ90 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPG7Q9UQ90 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.24■■■□□ 2.59
SPG7Q9UQ90 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SPG7Q9UQ90 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SPG7Q9UQ90 MIR6724-1-201ENST00000616420 92 ntBASIC31.23■■■□□ 2.59
SPG7Q9UQ90 MIR6724-2-201ENST00000616483 92 ntBASIC31.23■■■□□ 2.59
SPG7Q9UQ90 MIR6724-4-201ENST00000617390 92 ntBASIC31.23■■■□□ 2.59
SPG7Q9UQ90 MIR6724-3-201ENST00000622482 92 ntBASIC31.23■■■□□ 2.59
SPG7Q9UQ90 AL117332.1-201ENST00000622628 974 ntBASIC31.23■■■□□ 2.59
SPG7Q9UQ90 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPG7Q9UQ90 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPG7Q9UQ90 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
SPG7Q9UQ90 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.21■■■□□ 2.59
SPG7Q9UQ90 MIR3621-201ENST00000580529 85 ntBASIC31.2■■■□□ 2.59
SPG7Q9UQ90 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SPG7Q9UQ90 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
SPG7Q9UQ90 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
SPG7Q9UQ90 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms