Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC36.31■■■■□ 3.4
PTPN23Q9H3S7 BX664725.1-201ENST00000438252 379 ntBASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 AC011551.1-201ENST00000614101 683 ntBASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
PTPN23Q9H3S7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 ERN1-208ENST00000606895 2068 ntBASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC36.29■■■■□ 3.4
PTPN23Q9H3S7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 AL592295.1-201ENST00000400984 884 ntBASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 AL356441.2-201ENST00000443009 864 ntBASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC36.28■■■■□ 3.4
PTPN23Q9H3S7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC36.27■■■■□ 3.4
PTPN23Q9H3S7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC36.27■■■■□ 3.4
PTPN23Q9H3S7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC36.27■■■■□ 3.4
PTPN23Q9H3S7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC36.27■■■■□ 3.4
PTPN23Q9H3S7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC36.26■■■■□ 3.4
PTPN23Q9H3S7 AC137630.3-201ENST00000607245 391 ntBASIC36.26■■■■□ 3.4
PTPN23Q9H3S7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
PTPN23Q9H3S7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC36.26■■■■□ 3.39
PTPN23Q9H3S7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
PTPN23Q9H3S7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
PTPN23Q9H3S7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
PTPN23Q9H3S7 AL121749.1-202ENST00000609313 2153 ntBASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 AC131212.1-201ENST00000613771 668 ntBASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC36.23■■■■□ 3.39
PTPN23Q9H3S7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 UNC93B8-201ENST00000511903 705 ntBASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 MIR4787-201ENST00000607364 84 ntBASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
PTPN23Q9H3S7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
PTPN23Q9H3S7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
PTPN23Q9H3S7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC36.21■■■■□ 3.39
PTPN23Q9H3S7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
PTPN23Q9H3S7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.21■■■■□ 3.39
PTPN23Q9H3S7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC36.2■■■■□ 3.39
PTPN23Q9H3S7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
PTPN23Q9H3S7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
PTPN23Q9H3S7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC36.2■■■■□ 3.39
PTPN23Q9H3S7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC36.2■■■■□ 3.39
PTPN23Q9H3S7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.38
PTPN23Q9H3S7 AC021242.3-201ENST00000607598 1377 ntBASIC36.2■■■■□ 3.38
PTPN23Q9H3S7 AC010501.1-201ENST00000606270 1962 ntBASIC36.19■■■■□ 3.38
PTPN23Q9H3S7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC36.19■■■■□ 3.38
PTPN23Q9H3S7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC36.19■■■■□ 3.38
PTPN23Q9H3S7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC36.18■■■■□ 3.38
PTPN23Q9H3S7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC36.18■■■■□ 3.38
PTPN23Q9H3S7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
PTPN23Q9H3S7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
PTPN23Q9H3S7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC36.17■■■■□ 3.38
PTPN23Q9H3S7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
PTPN23Q9H3S7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
PTPN23Q9H3S7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 KRT125P-201ENST00000546827 989 ntBASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 GRAMD4P7-201ENST00000578182 1232 ntBASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC36.16■■■■□ 3.38
PTPN23Q9H3S7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC36.15■■■■□ 3.38
PTPN23Q9H3S7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.15■■■■□ 3.38
PTPN23Q9H3S7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC36.15■■■■□ 3.38
PTPN23Q9H3S7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
PTPN23Q9H3S7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC36.14■■■■□ 3.38
PTPN23Q9H3S7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC36.14■■■■□ 3.38
PTPN23Q9H3S7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC36.14■■■■□ 3.38
PTPN23Q9H3S7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC36.14■■■■□ 3.38
PTPN23Q9H3S7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC36.13■■■■□ 3.38
PTPN23Q9H3S7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC36.13■■■■□ 3.37
PTPN23Q9H3S7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
PTPN23Q9H3S7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC36.13■■■■□ 3.37
PTPN23Q9H3S7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms