Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NUCKS1Q9H1E3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NUCKS1Q9H1E3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NUCKS1Q9H1E3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NUCKS1Q9H1E3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NUCKS1Q9H1E3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NUCKS1Q9H1E3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
NUCKS1Q9H1E3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NUCKS1Q9H1E3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NUCKS1Q9H1E3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NUCKS1Q9H1E3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NUCKS1Q9H1E3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
NUCKS1Q9H1E3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NUCKS1Q9H1E3 SMPD5-203ENST00000639008 1464 ntBASIC25.64■■□□□ 1.69
NUCKS1Q9H1E3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NUCKS1Q9H1E3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.63■■□□□ 1.69
NUCKS1Q9H1E3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.62■■□□□ 1.69
NUCKS1Q9H1E3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 ECEL1P2-201ENST00000461596 1295 ntBASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NUCKS1Q9H1E3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.6■■□□□ 1.69
NUCKS1Q9H1E3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
NUCKS1Q9H1E3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 LINC01124-201ENST00000409786 2117 ntBASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.58■■□□□ 1.69
NUCKS1Q9H1E3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NUCKS1Q9H1E3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NUCKS1Q9H1E3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NUCKS1Q9H1E3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NUCKS1Q9H1E3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NUCKS1Q9H1E3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.56■■□□□ 1.68
NUCKS1Q9H1E3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NUCKS1Q9H1E3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
NUCKS1Q9H1E3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.56■■□□□ 1.68
NUCKS1Q9H1E3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
NUCKS1Q9H1E3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NUCKS1Q9H1E3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NUCKS1Q9H1E3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 LINC00543-201ENST00000567234 1845 ntBASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 AC141586.4-201ENST00000624558 1573 ntBASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 ABHD17AP5-201ENST00000580133 923 ntBASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NUCKS1Q9H1E3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NUCKS1Q9H1E3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.53■■□□□ 1.68
NUCKS1Q9H1E3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NUCKS1Q9H1E3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NUCKS1Q9H1E3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
NUCKS1Q9H1E3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms