Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM5Q96HC4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 AP003733.4-201ENST00000623785 1697 ntBASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PDLIM5Q96HC4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.27■■□□□ 1.32
PDLIM5Q96HC4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PDLIM5Q96HC4 RARRES2P2-201ENST00000394842 485 ntBASIC23.27■■□□□ 1.32
PDLIM5Q96HC4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM5Q96HC4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM5Q96HC4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM5Q96HC4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM5Q96HC4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.26■■□□□ 1.31
PDLIM5Q96HC4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.26■■□□□ 1.31
PDLIM5Q96HC4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PDLIM5Q96HC4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
PDLIM5Q96HC4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PDLIM5Q96HC4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.24■■□□□ 1.31
PDLIM5Q96HC4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM5Q96HC4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PDLIM5Q96HC4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PDLIM5Q96HC4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDLIM5Q96HC4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 AL139125.2-201ENST00000623134 1869 ntBASIC23.22■■□□□ 1.31
PDLIM5Q96HC4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 AL592293.1-201ENST00000502889 1188 ntBASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDLIM5Q96HC4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.2■■□□□ 1.3
PDLIM5Q96HC4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 MIR6089-201ENST00000616698 64 ntBASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.19■■□□□ 1.3
PDLIM5Q96HC4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDLIM5Q96HC4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM5Q96HC4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 SPCS2P3-201ENST00000500401 656 ntBASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 AC018755.3-202ENST00000596210 929 ntBASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 AC093323.1-202ENST00000635031 2045 ntBASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PDLIM5Q96HC4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms